Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_4077 |
Symbol | mdtL |
ID | 6146957 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | + |
Start bp | 4168283 |
End bp | 4169458 |
Gene Length | 1176 bp |
Protein Length | 391 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 641618901 |
Product | multidrug efflux system protein MdtL |
Protein accession | YP_001746039 |
Protein GI | 170680918 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 50 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCCGCT TTTTGATTTG TAGTTTTGCC CTGGTTTTAC TTTATCCCGC CGGGATTGAT ATGTACCTCG TTGGTTTACC GCGCATCGCT GCCGATCTCA ATGCCAGCGA AGCGCAGTTG CATATTGCGT TCTCCGTTTA TCTGGCGGGC ATGGCAGCTG CGATGTTATT TGCCGGTAAA GTGGCCGATC GTTCAGGGAG AAAGCCTGTC GCCATACCCG GCGCGGCGCT ATTTATTATC GCCTCGGTGT TCTGTTCACT GGCTGAAACC AGCACGTTAT TTCTTGCAGG GCGCTTTCTA CAGGGGCTGG GCGCGGGCTG TTGTTACGTG GTGGCGTTCG CCATTTTACG CGACACACTG GATGATCGAC GTCGGGCAAA GGTACTGTCG CTACTCAACG GCATTACCTG CATCATTCCG GTGTTAGCGC CGGTGCTCGG ACACCTGATT ATGCTTAAAT TCCCTTGGCA GAGTCTGTTC TGGACGATGG CAACGATGGG CATCGCGGTA CTGATGTTGT CTTTGTTTAT TTTAAAAGAA ACGCGCCCTG CGGCCCCCGC AGCTTCTGAC AAACCACGAG AAAATAGCGA GTCACTGCTT AACCGGTTTT TCCTCAGCCG TGTTGTTATC ACCACCCTCA GCGTTTCGGT GATCCTCACC TTCGTCAACA CGTCGCCAGT ATTGCTGATG GAAATCATGG GTTTTGAGCG CGGAGAATAC GCCACCATTA TGGCGTTGAC CGCTGGCGTC AGCATGACCG TTTCATTCTC CACGCCGTTT GCGCTGGGAA TTTTTAAGCC ACGTACGTTG ATGATCACCT CACAGGTGTT ATTCCTGGCG GCGGGGATCA CCCTTGCCGT TTCACCTTCC CATGCGGTTT CGCTGTTTGG TATCACGCTG ATTTGCGCCG GTTTCTCGGT AGGTTTTGGC GTAGCGATGA GTCAGGCGTT AGGGCCGTTT TCATTACGCG CGGGCGTAGC CAGCTCGACC TTAGGTATTG CGCAAGTTTG CGGTTCGTCA CTGTGGATTT GGCTGGCGGC GGTGGTTGGT ATCGGCGCAT GGAATATGCT GATCGGGATT CTGATTGCCT GTAGCATAGT GAGCCTGTTG CTGATTATGT TCGTCGCGCC TGGACGCCCG GTTGCCGCTC ATGAAGAAAT CCATCACCAC GCTTGA
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Protein sequence | MSRFLICSFA LVLLYPAGID MYLVGLPRIA ADLNASEAQL HIAFSVYLAG MAAAMLFAGK VADRSGRKPV AIPGAALFII ASVFCSLAET STLFLAGRFL QGLGAGCCYV VAFAILRDTL DDRRRAKVLS LLNGITCIIP VLAPVLGHLI MLKFPWQSLF WTMATMGIAV LMLSLFILKE TRPAAPAASD KPRENSESLL NRFFLSRVVI TTLSVSVILT FVNTSPVLLM EIMGFERGEY ATIMALTAGV SMTVSFSTPF ALGIFKPRTL MITSQVLFLA AGITLAVSPS HAVSLFGITL ICAGFSVGFG VAMSQALGPF SLRAGVASST LGIAQVCGSS LWIWLAAVVG IGAWNMLIGI LIACSIVSLL LIMFVAPGRP VAAHEEIHHH A
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