Gene EcSMS35_4077 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_4077 
SymbolmdtL 
ID6146957 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp4168283 
End bp4169458 
Gene Length1176 bp 
Protein Length391 aa 
Translation table11 
GC content54% 
IMG OID641618901 
Productmultidrug efflux system protein MdtL 
Protein accessionYP_001746039 
Protein GI170680918 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones50 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCCGCT TTTTGATTTG TAGTTTTGCC CTGGTTTTAC TTTATCCCGC CGGGATTGAT 
ATGTACCTCG TTGGTTTACC GCGCATCGCT GCCGATCTCA ATGCCAGCGA AGCGCAGTTG
CATATTGCGT TCTCCGTTTA TCTGGCGGGC ATGGCAGCTG CGATGTTATT TGCCGGTAAA
GTGGCCGATC GTTCAGGGAG AAAGCCTGTC GCCATACCCG GCGCGGCGCT ATTTATTATC
GCCTCGGTGT TCTGTTCACT GGCTGAAACC AGCACGTTAT TTCTTGCAGG GCGCTTTCTA
CAGGGGCTGG GCGCGGGCTG TTGTTACGTG GTGGCGTTCG CCATTTTACG CGACACACTG
GATGATCGAC GTCGGGCAAA GGTACTGTCG CTACTCAACG GCATTACCTG CATCATTCCG
GTGTTAGCGC CGGTGCTCGG ACACCTGATT ATGCTTAAAT TCCCTTGGCA GAGTCTGTTC
TGGACGATGG CAACGATGGG CATCGCGGTA CTGATGTTGT CTTTGTTTAT TTTAAAAGAA
ACGCGCCCTG CGGCCCCCGC AGCTTCTGAC AAACCACGAG AAAATAGCGA GTCACTGCTT
AACCGGTTTT TCCTCAGCCG TGTTGTTATC ACCACCCTCA GCGTTTCGGT GATCCTCACC
TTCGTCAACA CGTCGCCAGT ATTGCTGATG GAAATCATGG GTTTTGAGCG CGGAGAATAC
GCCACCATTA TGGCGTTGAC CGCTGGCGTC AGCATGACCG TTTCATTCTC CACGCCGTTT
GCGCTGGGAA TTTTTAAGCC ACGTACGTTG ATGATCACCT CACAGGTGTT ATTCCTGGCG
GCGGGGATCA CCCTTGCCGT TTCACCTTCC CATGCGGTTT CGCTGTTTGG TATCACGCTG
ATTTGCGCCG GTTTCTCGGT AGGTTTTGGC GTAGCGATGA GTCAGGCGTT AGGGCCGTTT
TCATTACGCG CGGGCGTAGC CAGCTCGACC TTAGGTATTG CGCAAGTTTG CGGTTCGTCA
CTGTGGATTT GGCTGGCGGC GGTGGTTGGT ATCGGCGCAT GGAATATGCT GATCGGGATT
CTGATTGCCT GTAGCATAGT GAGCCTGTTG CTGATTATGT TCGTCGCGCC TGGACGCCCG
GTTGCCGCTC ATGAAGAAAT CCATCACCAC GCTTGA
 
Protein sequence
MSRFLICSFA LVLLYPAGID MYLVGLPRIA ADLNASEAQL HIAFSVYLAG MAAAMLFAGK 
VADRSGRKPV AIPGAALFII ASVFCSLAET STLFLAGRFL QGLGAGCCYV VAFAILRDTL
DDRRRAKVLS LLNGITCIIP VLAPVLGHLI MLKFPWQSLF WTMATMGIAV LMLSLFILKE
TRPAAPAASD KPRENSESLL NRFFLSRVVI TTLSVSVILT FVNTSPVLLM EIMGFERGEY
ATIMALTAGV SMTVSFSTPF ALGIFKPRTL MITSQVLFLA AGITLAVSPS HAVSLFGITL
ICAGFSVGFG VAMSQALGPF SLRAGVASST LGIAQVCGSS LWIWLAAVVG IGAWNMLIGI
LIACSIVSLL LIMFVAPGRP VAAHEEIHHH A