| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_4064 |
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| Symbol | gyrB |
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| ID | 6147196 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | - |
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| Start bp | 4154373 |
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| End bp | 4156787 |
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| Gene Length | 2415 bp |
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| Protein Length | 804 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 641618889 |
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| Product | DNA gyrase subunit B |
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| Protein accession | YP_001746027 |
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| Protein GI | 170680955 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0187] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit |
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| TIGRFAM ID | [TIGR01059] DNA gyrase, B subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0861092 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 54 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGAATT CTTATGACTC CTCCAGTATC AAAGTCCTGA AAGGGCTGGA TGCGGTGCGT
AAGCGCCCGG GTATGTATAT CGGCGACACG GATGACGGCA CCGGTCTGCA CCACATGGTA
TTCGAGGTGG TAGATAACGC TATCGACGAA GCGCTCGCGG GTCACTGTAA AGAAATTATC
GTCACCATTC ACGCCGATAA CTCTGTCTCT GTACAGGATG ACGGGCGCGG CATTCCGACC
GGTATTCACC CGGAAGAGGG CGTATCGGCG GCGGAAGTGA TCATGACCGT TCTGCACGCA
GGCGGTAAAT TTGACGATAA CTCCTATAAA GTGTCCGGCG GTCTGCACGG CGTTGGTGTT
TCGGTAGTAA ACGCCCTGTC GCAAAAACTG GAGCTGGTTA TCCAGCGCGA GGGTAAAATT
CACCGTCAGA TCTACGAACA CGGTGTACCG CAGGCCCCGC TGGCGGTTAC CGGCGAGACT
GAAAAAACCG GCACCATGGT GCGTTTCTGG CCAAGCCTTG AAACCTTCAC CAATGTGACC
GAGTTCGAAT ATGACATTCT GGCGAAACGT CTGCGTGAGT TGTCGTTCCT CAACTCCGGC
GTTTCCATTC GTCTGCGCGA TAAGCGCGAC GGCAAAGAAG ACCACTTCCA CTATGAAGGC
GGCATCAAGG CGTTCGTTGA ATATCTGAAC AAGAACAAAA CGCCGATCCA CCCGAATATC
TTCTACTTCT CCACTGAAAA AGACGGTATT GGCGTCGAAG TGGCGTTGCA GTGGAACGAT
GGCTTCCAGG AAAACATCTA CTGCTTTACC AACAACATTC CGCAGCGTGA CGGCGGTACT
CACCTGGCAG GCTTCCGTGC GGCGATGACC CGTACCCTGA ACGCCTACAT GGACAAAGAA
GGCTACAGCA AAAAAGCCAA AGTCAGCGCC ACCGGTGACG ATGCGCGTGA AGGCCTGATT
GCGGTCGTTT CCGTGAAAGT GCCGGACCCG AAATTCTCCT CCCAGACCAA AGACAAACTG
GTTTCTTCTG AGGTGAAATC GGCGGTTGAA CAGCAGATGA ACGAACTGCT GGCGGAATAC
CTGCTGGAAA ACCCAACCGA CGCGAAAATC GTGGTTGGCA AAATTATCGA TGCTGCCCGT
GCCCGTGAAG CTGCGCGTCG CGCGCGTGAA ATGACCCGCC GTAAAGGTGC GCTCGACTTA
GCGGGCCTGC CGGGCAAACT GGCAGACTGC CAGGAACGCG ATCCGGCGCT CTCTGAACTG
TACCTGGTGG AAGGGGACTC CGCGGGCGGC TCTGCGAAGC AGGGGCGTAA CCGCAAGAAC
CAGGCGATTC TGCCGCTGAA GGGTAAAATC CTCAACGTTG AGAAAGCGCG CTTCGATAAG
ATGCTCTCTT CTCAGGAAGT GGCGACGCTG ATCACCGCGC TTGGCTGTGG TATCGGTCGT
GACGAGTACA ACCCGGACAA ACTGCGTTAT CACAACATCA TCATCATGAC CGATGCGGAC
GTCGACGGCT CGCACATTCG TACGCTGCTG TTGACCTTCT TCTATCGTCA GATGCCGGAA
ATCGTTGAAC GCGGTCACGT CTACATCGCT CAGCCGCCGC TGTACAAAGT GAAGAAAGGC
AAGCAGGAAC AGTACATTAA AGACGACGAA GCGATGGATC AGTACCAGAT CTCTATCGCG
CTGGATGGCG CAACGCTGCA CACCAACGCC AGTGCACCGG CGCTGGCTGG CGAAGCGTTA
GAGAAACTGG TGTCTGAGTA CAACGCGACG CAGAAAATGA TCAACCGCAT GGAGCGTCGT
TATCCGAAAG CAATGCTGAA AGAGCTTATC TATCAGCCGA CGTTGACGGA AACCGACCTT
TCTGACGAGC AAACCGTTAC CCGCTGGGTG AACGCGCTGG TCAGCGAACT GAACGATAAA
GAACAGCACG GCAGCCAGTG GAAGTTTGAT GTCCATACCA ATGCCGAACA AAACCTGTTC
GAGCCGATTG TTCGCGTGCG TACCCACGGT GTGGATACTG ACTATCCGCT GGATCACGAA
TTTATCACCG GCGGCGAATA TCGTCGTATC TGCACGCTGG GTGAGAAACT GCGTGGCTTG
CTGGAAGAAG ATGCATTTAT CGAACGTGGC GAACGTCGTC AGCCGGTAGC CAGCTTCGAG
CAGGCGCTGG ACTGGCTGGT GAAAGAGTCC CGTCGCGGCC TCTCCATCCA GCGTTATAAA
GGTCTGGGCG AGATGAACCC GGAACAGCTG TGGGAAACCA CCATGGATCC GGAAAGCCGT
CGTATGCTGC GCGTTACCGT TAAAGATGCG ATTGCTGCCG ACCAGTTGTT CACTACGCTT
ATGGGCGACG CCGTTGAACC GCGCCGTGCG TTTATCGAAG AGAACGCCCT GAAAGCGGCA
AATATCGATA TTTAA
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| Protein sequence | MSNSYDSSSI KVLKGLDAVR KRPGMYIGDT DDGTGLHHMV FEVVDNAIDE ALAGHCKEII
VTIHADNSVS VQDDGRGIPT GIHPEEGVSA AEVIMTVLHA GGKFDDNSYK VSGGLHGVGV
SVVNALSQKL ELVIQREGKI HRQIYEHGVP QAPLAVTGET EKTGTMVRFW PSLETFTNVT
EFEYDILAKR LRELSFLNSG VSIRLRDKRD GKEDHFHYEG GIKAFVEYLN KNKTPIHPNI
FYFSTEKDGI GVEVALQWND GFQENIYCFT NNIPQRDGGT HLAGFRAAMT RTLNAYMDKE
GYSKKAKVSA TGDDAREGLI AVVSVKVPDP KFSSQTKDKL VSSEVKSAVE QQMNELLAEY
LLENPTDAKI VVGKIIDAAR AREAARRARE MTRRKGALDL AGLPGKLADC QERDPALSEL
YLVEGDSAGG SAKQGRNRKN QAILPLKGKI LNVEKARFDK MLSSQEVATL ITALGCGIGR
DEYNPDKLRY HNIIIMTDAD VDGSHIRTLL LTFFYRQMPE IVERGHVYIA QPPLYKVKKG
KQEQYIKDDE AMDQYQISIA LDGATLHTNA SAPALAGEAL EKLVSEYNAT QKMINRMERR
YPKAMLKELI YQPTLTETDL SDEQTVTRWV NALVSELNDK EQHGSQWKFD VHTNAEQNLF
EPIVRVRTHG VDTDYPLDHE FITGGEYRRI CTLGEKLRGL LEEDAFIERG ERRQPVASFE
QALDWLVKES RRGLSIQRYK GLGEMNPEQL WETTMDPESR RMLRVTVKDA IAADQLFTTL
MGDAVEPRRA FIEENALKAA NIDI
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