Gene EcSMS35_4056 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_4056 
Symbol 
ID6145930 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp4146121 
End bp4147206 
Gene Length1086 bp 
Protein Length361 aa 
Translation table11 
GC content51% 
IMG OID641618880 
Productputative oxidoreductase 
Protein accessionYP_001746018 
Protein GI170681012 
COG category[C] Energy production and conversion 
COG ID[COG0644] Dehydrogenases (flavoproteins) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones57 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATGAATG TGAGTGAAAA GATGGAACAT TTCGACGTGG CGATTATTGG CCTCGGCCCG 
GCAGGGTCGG TGTTGGCACG AACGTTAGCC AGCAAAATGC AGGTGATCGC GCTGGATAAA
AAGCACCAGT GTGGTACTGA AGGTTTCAGC AAACCCTGCG GCGGTCTGCT GGCACCGGAC
GCGCAGCGAT CTTTTATTCG CGATGGACTG ACGCTTCCTG TCGATGTGAT CGCCAATCCA
CAGATTTTCA GCGTCAAAAC TGTCGACGTC GCCGCATCGC TCACGCGTAA CTACCAGCGA
AGCTATATCA ATATTAATCG CCATGCTTTC GACTTGTGGA TGAAATCGCT GATCCCCGCC
AGCGTTGAGG TTTACCACGA CAGCCTGTGC CGAAAAATCT GGCGTGAGGA TGATAAATGG
CATGTCATTT TTCGTGCAGA CGGTTGGGAG CAGCATATTA CTGCCCGCTA TCTGGTCGGT
GCCGATGGCG CAAACTCGAT GGTGCGGCGA CATCTCTACC CGGATCATCA AATTCGTAAA
TATGTCGCTA TCCAGCAGTG GTTCGCAGAG AAACATCCGG TGCCGTTCTA CTCCTGCATC
TTTGATAATG CGATAACTGA CTGTTACTCA TGGAGTATCA GCAAAGACGG TTATTTTATC
TTTGGCGGTG CCTATCCAAT GAAAGACGGT CAGACGCGTT TCGCGACGCT GAAAGAGAAA
ATGAGCGCCT TTCAGTTCCA GTTTGGCAAA GCGGTGAAAA GTGAGAAATG CACGGTGCTG
TTTCCCTCAC GCTGGCAGGA TTTTGTCTGC GGTAAGGACA ATGCCTTTCT GATTGGTGAA
GCGGCGGGAT TTATCAGCGC CAGCTCGCTG GAGGGGATTA GCTATGCGCT GGATAGCGCA
GAGATTCTGC GTTCGGTGTT ACTGAAGCAG CCAGAAAAGC TCAATACCGC TTACTGGCGC
GCCACCCGCA AACTGCGTTT AAAGCTCTAT GGCAAGATAG TCAAAAGCCG ATGCCTGACC
GCACCGGCTT TAAGAAAGTG GATTATGCGC AGTGGTGTGG CGCATATTCC ACAGTTGAAA
GATTAG
 
Protein sequence
MMNVSEKMEH FDVAIIGLGP AGSVLARTLA SKMQVIALDK KHQCGTEGFS KPCGGLLAPD 
AQRSFIRDGL TLPVDVIANP QIFSVKTVDV AASLTRNYQR SYININRHAF DLWMKSLIPA
SVEVYHDSLC RKIWREDDKW HVIFRADGWE QHITARYLVG ADGANSMVRR HLYPDHQIRK
YVAIQQWFAE KHPVPFYSCI FDNAITDCYS WSISKDGYFI FGGAYPMKDG QTRFATLKEK
MSAFQFQFGK AVKSEKCTVL FPSRWQDFVC GKDNAFLIGE AAGFISASSL EGISYALDSA
EILRSVLLKQ PEKLNTAYWR ATRKLRLKLY GKIVKSRCLT APALRKWIMR SGVAHIPQLK
D