Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_4032 |
Symbol | uhpC |
ID | 6144725 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | - |
Start bp | 4120744 |
End bp | 4122063 |
Gene Length | 1320 bp |
Protein Length | 439 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 641618857 |
Product | regulatory protein UhpC |
Protein accession | YP_001745995 |
Protein GI | 170679869 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2271] Sugar phosphate permease |
TIGRFAM ID | [TIGR00881] phosphoglycerate transporter family protein |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 45 |
Fosmid unclonability p-value | 0.47751 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTGCCGT TTCTGAAAGC GCCAGCTGAC GCGCCGTTGA TTAGCGATAA ACAAGAAATT GATGCCCGTT ACCGTTACTG GCGTCGGCAT ATTCTGCTGA CCATCTGGCT GGGTTACGCG CTGTTTTACT TCACGCGTAA AAGTTTTAAC GCCGCCGTAC CAGAAATCCT TGCTAACGGC GTGCTCAGCC GTAGCGATAT TGGCCTGTTA GCGACCCTGT TTTACATTAC CTACGGTGTG TCGAAGTTTG TCTCCGGCAT TGTCAGCGAT CGCTCAAATG CCCGTTATTT TATGGGGATA GGGCTTATTG CCACGGGCAT TATCAACATT CTGTTTGGCT TCTCGACGTC GCTATGGGCG TTTGCCGTGC TCTGGGTGTT GAACGCCTTT TTCCAGGGCT GGGGTTCACC GGTGTGTGCG CGTCTGTTAA CCGCCTGGTA TTCTCGTACC GAGCGCGGCG GTTGGTGGGC ATTATGGAAC ACGGCGCATA ACGTCGGCGG CGCACTCATT CCCATTGTGA TGGCAGCGAG CGCGCTGCAT TACGGCTGGC GTGCCGGGAT GATGATTGCC GGTTGTATGG CGATCGTCGT GGGGATTTTT CTCTGCTGGC GGCTGCGCGA TCGCCCGCAG GCGTTAGGTT TACCAGCGGT TGGTGAATGG CGGCACGACG CGCTGGAGAT TGCTCAACAA CAAGAAGGGG CAGGGCTGAC GCGTAAAGAG ATCCTCACCA AGTATGTGTT GCTGAATCCG TATATCTGGC TGCTTTCGTT TTGCTATGTG CTGGTCTATG TGGTCCGGGC GGCGATCAAC GACTGGGGCA ATTTGTATAT GTCCGAGACG CTGGGCGTCG ATCTGGTCAC GGCGAATACG GCAGTGACGA TGTTTGAACT GGGCGGATTT ATCGGTGCGC TGGTAGCGGG TTGGGGCTCG GACAAACTCT TTAACGGCAA CCGCGGGCCG ATGAATTTGA TTTTCGCTGC CGGAATTTTG CTTTCAGTCG GCTCGCTGTG GCTGATGCCA TTTGCCAGCT ACGTGATGCA GGCAACCTGC TTCTTCACCA TTGGTTTTTT TGTCTTTGGC CCGCAGATGT TAATCGGCAT GGCGGCGGCA GAATGTTCCC ACAAAGAGGC GGCAGGGGCG GCGACGGGGT TTGTCGGCTT GTTTGCTTAT CTGGGGGCGT CGCTTGCTGG TTGGCCGCTG GCGAAAGTGC TCGATACCTG GCACTGGAGC GGATTTTTTG TGGTTATCTC TATCGCCGCC GGGATTTCCG CACTGCTGTT ACTGCCCTTT TTGAACGCCC AGACACCGCG CGAAGCGTGA
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Protein sequence | MLPFLKAPAD APLISDKQEI DARYRYWRRH ILLTIWLGYA LFYFTRKSFN AAVPEILANG VLSRSDIGLL ATLFYITYGV SKFVSGIVSD RSNARYFMGI GLIATGIINI LFGFSTSLWA FAVLWVLNAF FQGWGSPVCA RLLTAWYSRT ERGGWWALWN TAHNVGGALI PIVMAASALH YGWRAGMMIA GCMAIVVGIF LCWRLRDRPQ ALGLPAVGEW RHDALEIAQQ QEGAGLTRKE ILTKYVLLNP YIWLLSFCYV LVYVVRAAIN DWGNLYMSET LGVDLVTANT AVTMFELGGF IGALVAGWGS DKLFNGNRGP MNLIFAAGIL LSVGSLWLMP FASYVMQATC FFTIGFFVFG PQMLIGMAAA ECSHKEAAGA ATGFVGLFAY LGASLAGWPL AKVLDTWHWS GFFVVISIAA GISALLLLPF LNAQTPREA
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