Gene EcSMS35_4032 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_4032 
SymboluhpC 
ID6144725 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp4120744 
End bp4122063 
Gene Length1320 bp 
Protein Length439 aa 
Translation table11 
GC content56% 
IMG OID641618857 
Productregulatory protein UhpC 
Protein accessionYP_001745995 
Protein GI170679869 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2271] Sugar phosphate permease 
TIGRFAM ID[TIGR00881] phosphoglycerate transporter family protein 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value0.47751 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGCCGT TTCTGAAAGC GCCAGCTGAC GCGCCGTTGA TTAGCGATAA ACAAGAAATT 
GATGCCCGTT ACCGTTACTG GCGTCGGCAT ATTCTGCTGA CCATCTGGCT GGGTTACGCG
CTGTTTTACT TCACGCGTAA AAGTTTTAAC GCCGCCGTAC CAGAAATCCT TGCTAACGGC
GTGCTCAGCC GTAGCGATAT TGGCCTGTTA GCGACCCTGT TTTACATTAC CTACGGTGTG
TCGAAGTTTG TCTCCGGCAT TGTCAGCGAT CGCTCAAATG CCCGTTATTT TATGGGGATA
GGGCTTATTG CCACGGGCAT TATCAACATT CTGTTTGGCT TCTCGACGTC GCTATGGGCG
TTTGCCGTGC TCTGGGTGTT GAACGCCTTT TTCCAGGGCT GGGGTTCACC GGTGTGTGCG
CGTCTGTTAA CCGCCTGGTA TTCTCGTACC GAGCGCGGCG GTTGGTGGGC ATTATGGAAC
ACGGCGCATA ACGTCGGCGG CGCACTCATT CCCATTGTGA TGGCAGCGAG CGCGCTGCAT
TACGGCTGGC GTGCCGGGAT GATGATTGCC GGTTGTATGG CGATCGTCGT GGGGATTTTT
CTCTGCTGGC GGCTGCGCGA TCGCCCGCAG GCGTTAGGTT TACCAGCGGT TGGTGAATGG
CGGCACGACG CGCTGGAGAT TGCTCAACAA CAAGAAGGGG CAGGGCTGAC GCGTAAAGAG
ATCCTCACCA AGTATGTGTT GCTGAATCCG TATATCTGGC TGCTTTCGTT TTGCTATGTG
CTGGTCTATG TGGTCCGGGC GGCGATCAAC GACTGGGGCA ATTTGTATAT GTCCGAGACG
CTGGGCGTCG ATCTGGTCAC GGCGAATACG GCAGTGACGA TGTTTGAACT GGGCGGATTT
ATCGGTGCGC TGGTAGCGGG TTGGGGCTCG GACAAACTCT TTAACGGCAA CCGCGGGCCG
ATGAATTTGA TTTTCGCTGC CGGAATTTTG CTTTCAGTCG GCTCGCTGTG GCTGATGCCA
TTTGCCAGCT ACGTGATGCA GGCAACCTGC TTCTTCACCA TTGGTTTTTT TGTCTTTGGC
CCGCAGATGT TAATCGGCAT GGCGGCGGCA GAATGTTCCC ACAAAGAGGC GGCAGGGGCG
GCGACGGGGT TTGTCGGCTT GTTTGCTTAT CTGGGGGCGT CGCTTGCTGG TTGGCCGCTG
GCGAAAGTGC TCGATACCTG GCACTGGAGC GGATTTTTTG TGGTTATCTC TATCGCCGCC
GGGATTTCCG CACTGCTGTT ACTGCCCTTT TTGAACGCCC AGACACCGCG CGAAGCGTGA
 
Protein sequence
MLPFLKAPAD APLISDKQEI DARYRYWRRH ILLTIWLGYA LFYFTRKSFN AAVPEILANG 
VLSRSDIGLL ATLFYITYGV SKFVSGIVSD RSNARYFMGI GLIATGIINI LFGFSTSLWA
FAVLWVLNAF FQGWGSPVCA RLLTAWYSRT ERGGWWALWN TAHNVGGALI PIVMAASALH
YGWRAGMMIA GCMAIVVGIF LCWRLRDRPQ ALGLPAVGEW RHDALEIAQQ QEGAGLTRKE
ILTKYVLLNP YIWLLSFCYV LVYVVRAAIN DWGNLYMSET LGVDLVTANT AVTMFELGGF
IGALVAGWGS DKLFNGNRGP MNLIFAAGIL LSVGSLWLMP FASYVMQATC FFTIGFFVFG
PQMLIGMAAA ECSHKEAAGA ATGFVGLFAY LGASLAGWPL AKVLDTWHWS GFFVVISIAA
GISALLLLPF LNAQTPREA