| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_4029 |
|---|
| Symbol | |
|---|
| ID | 6142883 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli SMS-3-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010498 |
|---|
| Strand | - |
|---|
| Start bp | 4115893 |
|---|
| End bp | 4117239 |
|---|
| Gene Length | 1347 bp |
|---|
| Protein Length | 448 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 641618854 |
|---|
| Product | sulfate permease family inorganic anion transporter |
|---|
| Protein accession | YP_001745992 |
|---|
| Protein GI | 170683707 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2252] Permeases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 46 |
|---|
| Fosmid unclonability p-value | 0.607592 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACAAAA AAATGAATAA TGACAATACC GATTACGTGA GTAATGAATC AGGGACGCTT
TCGCGATTAT TTAAACTACC TCAGCATGGG ACCACCGTCC GCACAGAATT GATTGCGGGG
ATGACCACTT TTTTAACCAT GGTGTACATC GTTTTTGTGA ACCCGCAAAT CCTCGGCGCG
GCACAAATGG ACCCGAAAGT GGTGTTTGTT ACCACCTGTT TGATTGCCGG TATCGGCAGT
ATTGCGATGG GGATATTTGC TAACTTACCC GTGGCGCTGG CTCCGGCAAT GGGGCTGAAC
GCCTTCTTTG CGTTCGTGGT CGTGGGGGCG ATGGGCATCT CCTGGCAGAC CGGGATGGGC
GCGATATTCT GGGGCGCAGT TGGGCTATTT CTGCTCACGC TGTTTCGTAT CCGGTACTGG
ATGATCTCCA ACATTCCATT AAGTTTACGT ATTGGTATCA CCAGCGGAAT CGGATTATTT
ATCGCCTTAA TGGGATTAAA AAATACTGGC GTTATTGTCG CCAATAAAGA CACCCTGGTG
ATGATTGGCG ATTTAAGTTC TCACGGCGTG TTGTTAGGTA TTTTAGGGTT TTTTATTATA
ACCGTGTTGT CATCACGTCA TTTTCATGCC GCGGTGCTTG TTTCTATTGT GGTGACGTCT
TGCTGTGGAT TATTTTTCGG TGATGTTCAT TTTAGCGGCG TCTATTCCAT TCCGCCTGAT
ATTAGCGGCG TCATTGGTGA AGTAGATTTG AGCGGCGCGT TAACACTTGA ACTCGCCGGT
ATCATTTTCT CCTTCATGCT GATCAACCTA TTTGATTCAT CAGGAACATT AATTGGTGTA
ACTGATAAAG CTGGCTTAAT AGATAGTAAC GGTAAATTCC CCAATATGAA TAAGGCGCTA
TATGTTGATA GCGTCAGTTC GGTGGCGGGC GCGTTTATCG GCACCTCGTC TGTTACCGCC
TATATTGAAA GTACTTCTGG TGTGGCAGTC GGTGGTCGCA CGGGGCTGAC TGCGGTTGTG
GTCGGCGTTA TGTTCCTGTT GGTTATGTTC TTCTCACCGC TGGTGGCGAT GGTTCCTCCT
TACGCAACCG CCGGAGCGTT AATCTTTGTT GGCGTGCTGA TGACTTCGAG CCTGGCGCGC
GTTAACTGGG ATGATTTTAC CGAATCGGTG CCTGCGTTTA TTACCACGGT GATGATGCCC
TTTACTTTCT CGATCACCGA AGGGATTGCA CTCGGCTTTA TGTCGTACTG CATCATGAAA
GTATGCACCG GGCGCTGGCG CGATCTGAAC CTGTGTGTGG TGGTGGTCGC AGCTCTGTTT
GCACTGAAGA TTATTCTGGT GGATTAG
|
|---|
| Protein sequence | MDKKMNNDNT DYVSNESGTL SRLFKLPQHG TTVRTELIAG MTTFLTMVYI VFVNPQILGA
AQMDPKVVFV TTCLIAGIGS IAMGIFANLP VALAPAMGLN AFFAFVVVGA MGISWQTGMG
AIFWGAVGLF LLTLFRIRYW MISNIPLSLR IGITSGIGLF IALMGLKNTG VIVANKDTLV
MIGDLSSHGV LLGILGFFII TVLSSRHFHA AVLVSIVVTS CCGLFFGDVH FSGVYSIPPD
ISGVIGEVDL SGALTLELAG IIFSFMLINL FDSSGTLIGV TDKAGLIDSN GKFPNMNKAL
YVDSVSSVAG AFIGTSSVTA YIESTSGVAV GGRTGLTAVV VGVMFLLVMF FSPLVAMVPP
YATAGALIFV GVLMTSSLAR VNWDDFTESV PAFITTVMMP FTFSITEGIA LGFMSYCIMK
VCTGRWRDLN LCVVVVAALF ALKIILVD
|
|---|
| |