| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_4025 |
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| Symbol | nepI |
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| ID | 6145324 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | - |
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| Start bp | 4113194 |
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| End bp | 4114378 |
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| Gene Length | 1185 bp |
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| Protein Length | 394 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 641618850 |
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| Product | ribonucleoside transporter |
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| Protein accession | YP_001745988 |
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| Protein GI | 170681625 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 48 |
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| Fosmid unclonability p-value | 0.84574 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGAAT TTATTGCCGA AAACCGCGGC GCGGATGTCA TCACCCGACC GAACTGGTCA
GCCGTATTCT CGGTGGCGTT TTGCGTCGCC TGTCTGATTA TCGTTGAGTT TTTGCCCGTC
AGTTTGTTGA CGCCAATGGC CCAGGATTTA GGCATTTCGG AAGGGGTTGC CGGGCAATCG
GTGACCGTGA CCGCCTTTGT GGCAATGTTT GCCAGTTTGT TTATTACCCA GACCATTCAG
GCCACTGACC GCCGCTATGT TGTTATTTTG TTTGCCGTTT TGCTGACGCT CTCCTGCTTG
CTGGTTTCCT TTGCTAACTC ATTCAGTTTG CTTTTAATCG GTCGTGCCTG TCTGGGGCTG
GCGCTGGGTG GGTTCTGGGC GATGTCGGCG TCGCTGACCA TGCGTCTGGT ACCGCCGCGT
ACGGTGCCGA AGGCGCTGTC GGTGATCTTC GGCGCGGTTT CTATTGCGCT GGTGATTGCC
GCACCGTTGG GCAGTTTTTT AGGCGAGCTT ATCGGTTGGC GCAATGTCTT TAATGCGGCG
GCGGTGATGG GCGTGCTGTG TATTTTCTGG ATTATCAAAT CATTGCCTTC GCTGCCAGGC
GAACCCTCGC ATCAGAAACA AAATACTTTC CGCTTATTAC AACGTCCGGG TGTGATGGCA
GGGATGATCG CCATATTCAT GTCTTTCGCC GGGCAGTTTG CTTTCTTCAC GTATATTCGC
CCGGTGTATA TGAACCTGGC GGGATTCGGC GTGGATGGCT TAACGCTGGT GCTGTTGAGT
TTTGGTATCG CCAGCTTTAT TGGTACGTCG CTTTCGTCGT TCATTCTTAA ACGTTCGGTA
AAACTGGCCT TAGCAGGCGC GCCGTTAATA CTGGCTGTGA GTGCGTTGGT GCTGACGTTG
TGGGGAAGCG ATAAAATCGT TGCTACCGGC GTGGCGATTA TCTGGGGGCT AACTTTTGCA
TTGGTTCCTG TCGGCTGGTC AACGTGGATC ACCCGCTCAC TGGCCGATCA GGCAGAAAAA
GCCGGGTCTA TTCAGGTGGC GGTTATTCAG CTTGCTAATA CCTGTGGCGC GGCAATCGGC
GGTTATGCGC TGGATAATAT TGGTCTGACT TCGCCGTTGA TGTTGTCCGG CACATTGATG
TTGCTGACGG CGTTATTGGT CACCGCAAAG GTGAAAATGA AGTAA
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| Protein sequence | MSEFIAENRG ADVITRPNWS AVFSVAFCVA CLIIVEFLPV SLLTPMAQDL GISEGVAGQS
VTVTAFVAMF ASLFITQTIQ ATDRRYVVIL FAVLLTLSCL LVSFANSFSL LLIGRACLGL
ALGGFWAMSA SLTMRLVPPR TVPKALSVIF GAVSIALVIA APLGSFLGEL IGWRNVFNAA
AVMGVLCIFW IIKSLPSLPG EPSHQKQNTF RLLQRPGVMA GMIAIFMSFA GQFAFFTYIR
PVYMNLAGFG VDGLTLVLLS FGIASFIGTS LSSFILKRSV KLALAGAPLI LAVSALVLTL
WGSDKIVATG VAIIWGLTFA LVPVGWSTWI TRSLADQAEK AGSIQVAVIQ LANTCGAAIG
GYALDNIGLT SPLMLSGTLM LLTALLVTAK VKMK
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