| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_4016 |
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| Symbol | nlpA |
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| ID | 6146490 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | - |
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| Start bp | 4095533 |
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| End bp | 4096351 |
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| Gene Length | 819 bp |
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| Protein Length | 272 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641618841 |
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| Product | cytoplasmic membrane lipoprotein-28 |
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| Protein accession | YP_001745979 |
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| Protein GI | 170680545 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1464] ABC-type metal ion transport system, periplasmic component/surface antigen |
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| TIGRFAM ID | [TIGR00363] lipoprotein, YaeC family |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.651354 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 54 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACTGA CAACACATCA TCTACGGGCG GGGGCCGCAT TATTGCTGGC AGGAATTCTG
CTGGCAGGTT GCGACCAGAG TAGCAGCGAT GCAAAACACA TTAAAGTTGG CGTTATAAAT
GGCGCAGAAC AAGATGTCGC GGAAGTCGCT AAAAAGGTGG CAAAAGAGAA ATATGGCCTC
GATGTTGAAC TGGTAGGATT TAGCGGTTCG TTGCTACCGA ACGATGCGAC AAATCATGGC
GAGCTTGATG CGAACGTCTT CCAGCATCGG CCCTTTCTTG AACAAGATAA TCAGGCGCAT
GGTTATAAAC TGGTAGCGGT GGGAAATACG TTTGTCTTCC CTATGGCGGG TTATTCCAAA
AAAATCAAAA CCGTGGCGCA AATAAAAGAA GGCGCGACAG TGGCGATCCC CAACGACCCG
ACCAACCTTG GTCGCGCGCT TTTACTGTTG CAAAAAGAGA AGCTAATTAC TCTGAAAGAG
GGAAAAGGGT TATTACCTAC CGCACTGGAT ATAACCGATA ATCCTCGTCA TTTGCAGATT
ATGGAACTCG AGGGGGCGCA GCTCCCGCGC GTACTGGATG ATCCCAAAGT TGATGTGGCG
ATTATCAGCA CCACTTACAT TCAGCAGACC GGGCTTTCTC CGGTGCACGA CAGCGTATTT
ATTGAAGATA AGAATTCGCC GTATGTGAAT ATTCTGGTGG CACGGGAAGA TAATAAGAAT
GCAGAAAACG TGAAGGAATT TCTGCAATCT TATCAATCGC CCGAAGTCGC TAAAGCGGCA
GAAACCATCT TTAACGGTGG CGCGGTGCCT GGCTGGTAA
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| Protein sequence | MKLTTHHLRA GAALLLAGIL LAGCDQSSSD AKHIKVGVIN GAEQDVAEVA KKVAKEKYGL
DVELVGFSGS LLPNDATNHG ELDANVFQHR PFLEQDNQAH GYKLVAVGNT FVFPMAGYSK
KIKTVAQIKE GATVAIPNDP TNLGRALLLL QKEKLITLKE GKGLLPTALD ITDNPRHLQI
MELEGAQLPR VLDDPKVDVA IISTTYIQQT GLSPVHDSVF IEDKNSPYVN ILVAREDNKN
AENVKEFLQS YQSPEVAKAA ETIFNGGAVP GW
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