| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_4006 |
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| Symbol | |
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| ID | 6146944 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | + |
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| Start bp | 4087811 |
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| End bp | 4088077 |
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| Gene Length | 267 bp |
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| Protein Length | 88 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 641618831 |
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| Product | AlpA family transcriptional regulator |
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| Protein accession | YP_001745969 |
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| Protein GI | 170682956 |
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| COG category | [K] Transcription |
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| COG ID | [COG3311] Predicted transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 58 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCAAGCTG TTTTTTCTTC CCCGTCTCCC GCCCCTGTGA CGCCACTGAT GCCGCTGCCG
GACATCACGC AGGAGCGTTT TTTACGTCTG CCGGAAGTGA TGCACCTGTG CGGCCTGTCA
CGCTCGACCA TCTATGAACT CATCCGTAAG GGGGAATTTC CGCCGCAGGT GAGTCTTGGC
GGTAAAAATG TGGCCTGGCT GCACTCTGAA GTCACCGCAT GGATGGCCGG ACGCATTGCC
GGACGCAAAC GGGGGTACGA CGCATGA
|
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| Protein sequence | MQAVFSSPSP APVTPLMPLP DITQERFLRL PEVMHLCGLS RSTIYELIRK GEFPPQVSLG
GKNVAWLHSE VTAWMAGRIA GRKRGYDA
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