Gene EcSMS35_3982 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_3982 
Symbol 
ID6144503 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand+ 
Start bp4056898 
End bp4057515 
Gene Length618 bp 
Protein Length205 aa 
Translation table11 
GC content53% 
IMG OID641618807 
Producthypothetical protein 
Protein accessionYP_001745946 
Protein GI170684015 
COG category[S] Function unknown 
COG ID[COG2860] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.182363 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones59 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGTTAC ACATTTTGTA TTTGGTTGGC ATTACTGCCG AAGCCATGAC GGGGGCGCTG 
GCGGCCGGAC GACGGCGCAT GGATACATTT GGCGTAATTA TTATTGCGAC CGCCACCGCA 
ATTGGCGGAG GGTCAGTGCG CGATATTCTG CTGGGCCACT ATCCGCTCGG CTGGGTCAAA 
CACCCGGAAT ATGTGATTAT TGTCGCTACC GCCGCAGTAC TCACCACTAT CGTTGCTCCT 
GTAATGCCTT ACCTGCGCAA AGTGTTTCTG GTGCTCGATG CGCTCGGACT GGTAGTCTTT 
TCTATCATTG GCGCACAGGT TGCACTGGAT ATGGGACACG GCCCGATCAT TGCCGTTGTC 
GCAGCTGTGA CGACCGGCGT ATTTGGCGGC GTTTTGCGCG ATATGTTCTG TAAACGCATC 
CCACTGGTAT TCCAGAAAGA GTTGTATGCC GGTGTCTCAT TTGCCTCCGC CGTGCTGTAC 
ATCGCGCTGC AACATTATGT TTCTAACCAT GATGTGGTGA TTATCTCCAC CCTGGTATTC 
GGCTTTTTTG CCCGCTTACT GGCGCTACGT CTTAAGCTGG GATTACCGGT CTTTTACTAC 
AGCCACGAAG GTCACTAA
 
Protein sequence
MLLHILYLVG ITAEAMTGAL AAGRRRMDTF GVIIIATATA IGGGSVRDIL LGHYPLGWVK 
HPEYVIIVAT AAVLTTIVAP VMPYLRKVFL VLDALGLVVF SIIGAQVALD MGHGPIIAVV 
AAVTTGVFGG VLRDMFCKRI PLVFQKELYA GVSFASAVLY IALQHYVSNH DVVIISTLVF 
GFFARLLALR LKLGLPVFYY SHEGH