Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_3976 |
Symbol | slmA |
ID | 6147256 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | + |
Start bp | 4052515 |
End bp | 4053111 |
Gene Length | 597 bp |
Protein Length | 198 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 641618802 |
Product | nucleoid occlusion protein |
Protein accession | YP_001745941 |
Protein GI | 170684116 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.027184 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 61 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAGAAA AACAAACTGC GAAAAGGAAC CGTCGCGAGG AAATACTTCA GTCTCTGGCG CTGATGCTGG AATCCAGCGA TGGAAGCCAA CGTATCACGA CGGCAAAACT GGCCGCCTCT GTCGGCGTTT CCGAAGCGGC ACTGTATCGC CACTTCCCCA GTAAGACCCG CATGTTCGAT AGCCTGATTG AGTTTATCGA AGATAGCCTG ATTACTCGCA TCAATCTGAT TCTGAAAGAT GAGAAAGACA CCACAGCGCG CCTGCGTCTG ATTGTGTTGC TGCTTCTCGG TTTTGGTGAG CGTAATCCTG GCCTGACCCG CATCCTCACT GGTCATGCAC TAATGTTTGA ACAGGATCGC CTGCAAGGGC GCATCAACCA GCTATTCGAG CGTATTGAAG CGCAGTTGCG TCAGGTATTG CGTGAAAAGA GAATGCGTGA GGGCGAAGGC TACGCGACGG ATGAAACCCT GCTGGCAAGC CAGATCCTGG CCTTCTGTGA AGGTATGCTG TCACGCTTTG TCCGCAGCGA GTTTAAATAC CGCCCGACGG ATGACTTTGA CGCCCGCTGG CCGCTAATTG CTGCACAGTT GCAGTAA
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Protein sequence | MAEKQTAKRN RREEILQSLA LMLESSDGSQ RITTAKLAAS VGVSEAALYR HFPSKTRMFD SLIEFIEDSL ITRINLILKD EKDTTARLRL IVLLLLGFGE RNPGLTRILT GHALMFEQDR LQGRINQLFE RIEAQLRQVL REKRMREGEG YATDETLLAS QILAFCEGML SRFVRSEFKY RPTDDFDARW PLIAAQLQ
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