Gene EcSMS35_3976 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_3976 
SymbolslmA 
ID6147256 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp4052515 
End bp4053111 
Gene Length597 bp 
Protein Length198 aa 
Translation table11 
GC content53% 
IMG OID641618802 
Productnucleoid occlusion protein 
Protein accessionYP_001745941 
Protein GI170684116 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.027184 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones61 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGAAA AACAAACTGC GAAAAGGAAC CGTCGCGAGG AAATACTTCA GTCTCTGGCG 
CTGATGCTGG AATCCAGCGA TGGAAGCCAA CGTATCACGA CGGCAAAACT GGCCGCCTCT
GTCGGCGTTT CCGAAGCGGC ACTGTATCGC CACTTCCCCA GTAAGACCCG CATGTTCGAT
AGCCTGATTG AGTTTATCGA AGATAGCCTG ATTACTCGCA TCAATCTGAT TCTGAAAGAT
GAGAAAGACA CCACAGCGCG CCTGCGTCTG ATTGTGTTGC TGCTTCTCGG TTTTGGTGAG
CGTAATCCTG GCCTGACCCG CATCCTCACT GGTCATGCAC TAATGTTTGA ACAGGATCGC
CTGCAAGGGC GCATCAACCA GCTATTCGAG CGTATTGAAG CGCAGTTGCG TCAGGTATTG
CGTGAAAAGA GAATGCGTGA GGGCGAAGGC TACGCGACGG ATGAAACCCT GCTGGCAAGC
CAGATCCTGG CCTTCTGTGA AGGTATGCTG TCACGCTTTG TCCGCAGCGA GTTTAAATAC
CGCCCGACGG ATGACTTTGA CGCCCGCTGG CCGCTAATTG CTGCACAGTT GCAGTAA
 
Protein sequence
MAEKQTAKRN RREEILQSLA LMLESSDGSQ RITTAKLAAS VGVSEAALYR HFPSKTRMFD 
SLIEFIEDSL ITRINLILKD EKDTTARLRL IVLLLLGFGE RNPGLTRILT GHALMFEQDR
LQGRINQLFE RIEAQLRQVL REKRMREGEG YATDETLLAS QILAFCEGML SRFVRSEFKY
RPTDDFDARW PLIAAQLQ