| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_3972 |
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| Symbol | rpmB |
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| ID | 6143112 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | - |
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| Start bp | 4049459 |
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| End bp | 4049695 |
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| Gene Length | 237 bp |
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| Protein Length | 78 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 641618798 |
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| Product | 50S ribosomal protein L28 |
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| Protein accession | YP_001745937 |
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| Protein GI | 170680615 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0227] Ribosomal protein L28 |
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| TIGRFAM ID | [TIGR00009] ribosomal protein L28 |
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| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00000229702 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 59 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCCCGAG TCTGCCAAGT TACTGGCAAG CGTCCGGTGA CCGGTAACAA CCGTTCCCAC
GCACTGAACG CGACTAAACG CCGTTTCCTG CCGAACCTGC ACTCTCACCG TTTCTGGGTT
GAGAGCGAGA AGCGTTTTGT CACCCTGCGC GTATCTGCTA AAGGTATGCG TGTAATCGAT
AAAAAAGGCA TCGATACAGT TCTGGCTGAA CTGCGTGCCC GTGGCGAAAA GTACTAA
|
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| Protein sequence | MSRVCQVTGK RPVTGNNRSH ALNATKRRFL PNLHSHRFWV ESEKRFVTLR VSAKGMRVID
KKGIDTVLAE LRARGEKY
|
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| |