| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_3964 |
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| Symbol | rfaI |
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| ID | 6143989 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | - |
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| Start bp | 4042147 |
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| End bp | 4043163 |
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| Gene Length | 1017 bp |
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| Protein Length | 338 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 641618790 |
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| Product | lipopolysaccharide 1,3-galactosyltransferase |
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| Protein accession | YP_001745929 |
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| Protein GI | 170681283 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1442] Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.185573 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 58 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGTGCCC ACTATTTTAA TCCACAAGAG ATGATCAATA AGACAATCAT CTTCGATGAA
AGGCCAGAGG CGTCAGTGGC ATCATCATTC CATGTTGCTT ATGGCATTGA TCAGAACTTT
CTTTTTGGTT GTGGTGTTTC AATCACGTCA GTTTTGTTAC ATAACAACGA CGTGAGTTTT
GTCTTCCACG TTTTTATTGA TGATATCCCT GACGCCGATA TCCAGCGTTT ATCCCAATTG
GCGAAAAGCT ATCATACCTG TATCCAGATC CATCTGGTAA ATTGTGAACG GCTTAAGGTA
TTACCGACGA CCAAAAATTG GTCTATTGCC ATGTATTTCC GTTTTGTAAT TGCAGATTAC
TTTATTGATC AACAAGATAA GATCCTGTAC CTGGATGCTG ATATCGCCTG TCAGGGAACC
TTAAAACCGC TGATAACAAT GGATCTTGCC AATAACGTTG CTGCTGTTGT TACTGAACGC
GATGCTAACT GGTGGTCGTT ACGGGCTCAA AGTCTGCAGT GTAATGAACT TGAAAAGGGT
TACTTTAATT CAGGTGTCCT GTTAATTAAT ACACCTGCGT GGGCGCAGGA GTCCGTTTCT
GCTAAAGCGA TGTCGATGCT TGCTGATAAA GCCGTCGTTT CCCGTTTAAC CTATATGGAT
CAAGATATAC TAAATCTTAT CCTGTTAGGG AAAGTTAAAT TCATTGATGC TAAATACAAT
ACGCAATTTA GTTTAAATTA TGAATTAAAA AAATCATTTA TTTGTCCAAT TAATGATGAA
GCCGTATTAA TTCATTATGT CGGCCCGACA AAACCCTGGC ATTACTGGGC CGGTTATCCA
AGCGCGCAGC CATTTATCAA AGCCAAAGAA GCATCGCCCT GGAAAAATGA ACAGTTAATG
CGGCCAATTA ACTCAAATTA TGCTCGTTAT TGCGCCAAGC ATAATTTTAA ACAAAATAAA
CCAATTAACG GGATAATGAA TTATATTTAT TATTTTTATT TAAAGATAAT AAAATGA
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| Protein sequence | MSAHYFNPQE MINKTIIFDE RPEASVASSF HVAYGIDQNF LFGCGVSITS VLLHNNDVSF
VFHVFIDDIP DADIQRLSQL AKSYHTCIQI HLVNCERLKV LPTTKNWSIA MYFRFVIADY
FIDQQDKILY LDADIACQGT LKPLITMDLA NNVAAVVTER DANWWSLRAQ SLQCNELEKG
YFNSGVLLIN TPAWAQESVS AKAMSMLADK AVVSRLTYMD QDILNLILLG KVKFIDAKYN
TQFSLNYELK KSFICPINDE AVLIHYVGPT KPWHYWAGYP SAQPFIKAKE ASPWKNEQLM
RPINSNYARY CAKHNFKQNK PINGIMNYIY YFYLKIIK
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