| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_3963 |
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| Symbol | rfaJ2 |
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| ID | 6144753 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | - |
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| Start bp | 4041135 |
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| End bp | 4042130 |
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| Gene Length | 996 bp |
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| Protein Length | 331 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 641618789 |
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| Product | lipopolysaccharide 1,2-glucosyltransferase |
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| Protein accession | YP_001745928 |
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| Protein GI | 170679827 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1442] Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.170676 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 56 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAATGAAT TTATAAAAGA ACGGTTTTCG TATTTAGCAG ATAATAAAAA AGAAAACGTC
CCAGAGCTAA ATGTTTCCTA CGGTATCGAT AAGAATTTTT TGTATGGTGC TGGCGTTTCA
ATTTCTTCCG TTTTGATTAA TAATTCAGAT ATTAATTTTG TCTTTCATGT TTTCACTGAT
TATGTGGATG ATGATTATTT AAAGTCATTT AATGAAACAG CAAAACAATT TAATACCTCA
ATTATTGTAT ATTTAATTGA CCCAAAATAC TTTGCTGATC TGCCGACGTC ACAGTTTTGG
TCGTACGCGA CATACTTCAG GGTATTGTCC TTTGAATATC TGAGTGAAAG TATTTCCACA
CTGCTGTATC TGGATGCCGA TGTCGTTTGT AAAGGAAGTC TGAAACCTCT CACAAAAATT
ATATTTAAAG ATGAGTTTGC TGCGGTTATT CCTGACAATG ATAGTACTCA GGCGGCATGT
GCAAAACGTC TTAACATTCC CGAAATGAAT GGACGTTATT TCAATGCAGG CGTTATCTAT
GTCAATCTTA AAAAATGGCA TGAAGCAAAT TTGACACCGT ATTTACTCAC GCTTTTACGA
GGGGAAACTA AATATGGCTC TCTTAAATAT TTAGATCAGG ATGCGTTGAA TATCGCATTT
AATATGAATA ATATCTACCT CGCGAAGGAT TTTGATACTA TTTATACCCT GAAAAACGAA
CTTCATGATC GTAGTCATCG AAAGTATCAG CAAACCATTA CCGATAAAAC AGTATTGATT
CACTATACAG GGATAACTAA ACCATGGCAT AGCTGGGCTG GATATCCGTC TGCATCATAC
TTTAATATCG CGCGTGAACA ATCTCCCTGG AAGAAATATC CTCTTAAAGA GGCGCGGACT
GTTGCAGAAA TGCAGAAACA ATATAAGCAT CTGTTTGCCC ATGGTGAGTA TATAAAAGGC
ATAACTTCAT TAATTAAGTA CAAGCTTAAG AAATAA
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| Protein sequence | MNEFIKERFS YLADNKKENV PELNVSYGID KNFLYGAGVS ISSVLINNSD INFVFHVFTD
YVDDDYLKSF NETAKQFNTS IIVYLIDPKY FADLPTSQFW SYATYFRVLS FEYLSESIST
LLYLDADVVC KGSLKPLTKI IFKDEFAAVI PDNDSTQAAC AKRLNIPEMN GRYFNAGVIY
VNLKKWHEAN LTPYLLTLLR GETKYGSLKY LDQDALNIAF NMNNIYLAKD FDTIYTLKNE
LHDRSHRKYQ QTITDKTVLI HYTGITKPWH SWAGYPSASY FNIAREQSPW KKYPLKEART
VAEMQKQYKH LFAHGEYIKG ITSLIKYKLK K
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