| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_3957 |
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| Symbol | rfaF |
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| ID | 6147338 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | + |
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| Start bp | 4034924 |
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| End bp | 4035970 |
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| Gene Length | 1047 bp |
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| Protein Length | 348 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 641618783 |
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| Product | ADP-heptose:LPS heptosyltransferase II |
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| Protein accession | YP_001745922 |
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| Protein GI | 170683841 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0859] ADP-heptose:LPS heptosyltransferase |
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| TIGRFAM ID | [TIGR02195] lipopolysaccharide heptosyltransferase II |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.000313085 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 49 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAATAC TGGTGATCGG CCCGTCTTGG GTTGGCGACA TGATGATGTC GCAAAGTCTC
TATCGCACGC TCCAGGCGCG CTATCCCCAG GCGATAATCG ACGTGATGGC ACCGGCATGG
TGCCGTCCAT TATTATCGCG GATGCCGGAA GTTAACGAAG CGATCCCTAT GCCTCTCGGT
CACGGAGCGC TGGAAATCGG CGAACGCCGC AAACTGGGTC ATAGTCTGCG TGAAAAGCGC
TACGACCGCG CCTACGTCTT ACCCAACTCC TTCAAATCCG CATTAGTGCC TTTCTTCGCG
GGTATTCCTC ATCGCACCGG CTGGCGCGGC GAGATGCGCT ACGGTTTACT TAACGATGTA
CGCGTGCTCG ATAAAGAAGC CTGGCCGCTA ATGGTGGAAC GCTATGTGGC GCTGGCCTAT
GACAAAGGCA TTATGCGTAC AGCACAAGAT CTGCCGCAGC CATTGTTATG GCCGCAGTTG
CAGGTGAGCG AAGGTGAAAA ATCATATACC TGTAATCAAT TTTCGCTCTC ATCAGAACGT
CCGATGATTG GCTTTTGCCC CGGAGCGGAG TTTGGTCCGG CAAAACGCTG GCCACACTAC
CACTATGCGG AGCTGGCAAA GCAGCTGATT GATGAAGGTT ATCAGGTGGT TCTGTTTGGC
TCTGCGAAAG ATCATGAAGC GGGCAATGAG ATTCTTGCCG CTTTAAATAC TGAGCAGCAG
GCATGGTGCC GGAACCTGGC AGGGGAAACA CAGCTTGATC AAGCGGTTAT CCTGATTGCA
GCCTGTAAAG CCATTGTCAC TAACGATTCT GGCCTGATGC ACGTTGCGGC GGCGCTCAAT
CGTCCGCTGG TTGCCTTGTA TGGTCCGAGT AGCCCGGACT TCACACCGCC GCTATCCCAT
AAAGCACGCG TGATCCGCCT GATTACCGGC TATCACAAAG TGCGTAAAGG TGACGCAGCG
GAGGGTTATC ACCAGAGCTT GATCGACATT ACTCCCCAGC GCGTACTGGA AGAACTCAAC
GCGCTATTGT TACAAGAGGA AGCCTGA
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| Protein sequence | MKILVIGPSW VGDMMMSQSL YRTLQARYPQ AIIDVMAPAW CRPLLSRMPE VNEAIPMPLG
HGALEIGERR KLGHSLREKR YDRAYVLPNS FKSALVPFFA GIPHRTGWRG EMRYGLLNDV
RVLDKEAWPL MVERYVALAY DKGIMRTAQD LPQPLLWPQL QVSEGEKSYT CNQFSLSSER
PMIGFCPGAE FGPAKRWPHY HYAELAKQLI DEGYQVVLFG SAKDHEAGNE ILAALNTEQQ
AWCRNLAGET QLDQAVILIA ACKAIVTNDS GLMHVAAALN RPLVALYGPS SPDFTPPLSH
KARVIRLITG YHKVRKGDAA EGYHQSLIDI TPQRVLEELN ALLLQEEA
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