| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_3953 |
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| Symbol | tdh |
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| ID | 6143740 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | - |
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| Start bp | 4031537 |
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| End bp | 4032562 |
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| Gene Length | 1026 bp |
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| Protein Length | 341 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 641618779 |
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| Product | L-threonine 3-dehydrogenase |
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| Protein accession | YP_001745918 |
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| Protein GI | 170683839 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG1063] Threonine dehydrogenase and related Zn-dependent dehydrogenases |
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| TIGRFAM ID | [TIGR00692] L-threonine 3-dehydrogenase
[TIGR01202] 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0503034 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 47 |
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| Fosmid unclonability p-value | 0.824331 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAAGCGT TATCCAAACT GAAAGCGGAA GAGGGCATCT GGATGACCGA CGTTCCTGTA
CCAGAACTCG GGCATAACGA TCTGCTGATT AAAATCCGTA AAACAGCCAT CTGCGGGACT
GACGTTCACA TCTATAACTG GGATGAGTGG TCGCAAAAAA CCATCCCGGT GCCGATGGTC
GTGGGCCATG AATATGTCGG TGAAGTGGTA GGTATTGGTC AGGAAGTGAA AGGCTTCAAG
ATTGGCGATC GCGTTTCTGG CGAAGGCCAT ATCACCTGCG GTCACTGTCG CAACTGTCGT
GGCGGTCGTA CCCATCTGTG CCGCAACACG ATCGGCGTCG GCGTTAACCG TCCGGGCTGC
TTTGCCGAGT ATCTGGTGAT TCCGGCGTTC AACGCTTTCA AAATCCCCGA CAATATCTCC
GATGATCTGG CTTCCATTTT TGATCCCTTC GGTAACGCCG TGCATACCGC GCTGTCGTTT
GATCTGGTGG GCGAGGATGT GCTGGTCTCT GGTGCAGGCC CGATTGGTAT TATGGCGGCG
GCGGTGGCGA AACACGTTGG TGCACGTAAC GTGGTGATTA CTGATGTTAA CGAATACCGC
CTTGAGCTGG CGCGTAAAAT GGGTATCACC CGTGCGGTTA ACGTCGCGAA AGAAAACCTT
AATGATGTGA TGACAGAACT GGGCATGACC GAAGGCTTTG ATGTCGGTCT GGAAATGTCC
GGTGCGCCGC CAGCGTTTCG TACCATGCTC GACACCATGA ACCACGGCGG TCGTATTGCG
ATGCTGGGTA TTCCACCGTC CGATATGTCT ATCGACTGGA CCAAAGTAAT CTTTAAAGGC
TTGTTCATTA AAGGTATTTA CGGTCGTGAG ATGTTTGAAA CCTGGTACAA GATGGCGGCG
CTGATTCAGT CTGGCCTCGA TCTCTCGCCG ATCATTACCC ATCGTTTCTC TATCGATGAT
TTCCAGAAGG GCTTTGACGC TATGCGTTCG GGCCAGTCCG GGAAAGTTAT TCTGAGCTGG
GATTAA
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| Protein sequence | MKALSKLKAE EGIWMTDVPV PELGHNDLLI KIRKTAICGT DVHIYNWDEW SQKTIPVPMV
VGHEYVGEVV GIGQEVKGFK IGDRVSGEGH ITCGHCRNCR GGRTHLCRNT IGVGVNRPGC
FAEYLVIPAF NAFKIPDNIS DDLASIFDPF GNAVHTALSF DLVGEDVLVS GAGPIGIMAA
AVAKHVGARN VVITDVNEYR LELARKMGIT RAVNVAKENL NDVMTELGMT EGFDVGLEMS
GAPPAFRTML DTMNHGGRIA MLGIPPSDMS IDWTKVIFKG LFIKGIYGRE MFETWYKMAA
LIQSGLDLSP IITHRFSIDD FQKGFDAMRS GQSGKVILSW D
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