| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_3946 |
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| Symbol | secB |
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| ID | 6147355 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | - |
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| Start bp | 4024878 |
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| End bp | 4025345 |
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| Gene Length | 468 bp |
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| Protein Length | 155 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 641618772 |
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| Product | preprotein translocase subunit SecB |
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| Protein accession | YP_001745911 |
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| Protein GI | 170681903 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1952] Preprotein translocase subunit SecB |
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| TIGRFAM ID | [TIGR00809] protein-export chaperone SecB |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 47 |
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| Fosmid unclonability p-value | 0.738209 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCAGAAC AAAACAACAC CGAAATGACT TTCCAGATCC AACGTATTTA TACCAAGGAT
ATTTCTTTCG AAGCGCCGAA CGCGCCGCAC GTTTTCCAGA AAGATTGGCA GCCAGAAGTT
AAACTTGATC TGGATACGGC ATCTTCTCAA CTGGCAGATG ACGTTTACGA AGTGGTACTG
CGTGTTACCG TAACGGCCTC CCTGGGCGAA GAAACCGCGT TCCTGTGTGA AGTTCAGCAG
GGCGGTATTT TCTCCATTGC GGGTATCGAG GGCACCCAGA TGGCACATTG CCTGGGTGCA
TACTGCCCGA ACATTCTGTT CCCGTATGCT CGTGAGTGCA TCACCAGCAT GGTATCCCGC
GGTACATTCC CGCAACTGAA CCTTGCGCCG GTTAACTTCG ATGCGCTGTT CATGAACTAT
TTGCAGCAGC AGGCTGGCGA AGGTACTGAA GAACATCAGG ATGCCTGA
|
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| Protein sequence | MSEQNNTEMT FQIQRIYTKD ISFEAPNAPH VFQKDWQPEV KLDLDTASSQ LADDVYEVVL
RVTVTASLGE ETAFLCEVQQ GGIFSIAGIE GTQMAHCLGA YCPNILFPYA RECITSMVSR
GTFPQLNLAP VNFDALFMNY LQQQAGEGTE EHQDA
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