Gene EcSMS35_3910 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_3910 
Symbol 
ID6146093 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp3981436 
End bp3982176 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content49% 
IMG OID641618736 
ProductMltA-interacting protein MipA 
Protein accessionYP_001745875 
Protein GI170680250 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3713] Outer membrane protein V 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value0.709992 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTAATTA ACCGCAATAT TGTGGCGTTA TTTGCGTTGC CTTTTATGGC AAGCGCAACT 
GCTTCTGAAT TATCCATTGG TGCTGGTGCG GCTTATAATG AATCGCCTTA TCGCGGTTAT
AATGAAAATA CAAAGGCAAT TCCGCTGATT AGTTATGAAG GTGATTCTTT TTATGTTCGT
CAGACCACGT TAGGTTTTAT TCTGTCGCAA AGTGAAAAAA ATGAACTTAG CCTGACCGCA
TCCTGGATGC CGCTGGAATT TGACCCTGCC GATAATGACG ATTATGCCAT GCAACAGCTT
GATAAGCGTG ATAGTACGGC TATGGCGGGG GTTGCCTGGT ATCACCACGA GCGTTGGGGA
ACCGTGAAAG CCTCTGCGGC TGCGGACGTT CTGGATAACA GCAACGGCTG GGTGGGTGAG
CTATCGGTAT TCCACAAAAT GCAGATAGGT CGCCTGTCGC TGACACCTGC GCTGGGCGTT
CTCTATTATG ACGAGAATTT CAGTGACTAT TACTATGGCA TTTCAGAGAG TGAGTCCCGT
CGTAGCGGTC TGGCAAGTTA TTCCGCGCAG GATGCCTGGG TGCCCTATGT CAGCCTGACG
GCAAAATACC CGATAGGAGA GCACGTCGTA TTGATGGCGA GCGCCGGATA CAGCGAGCTG
CCGGAAGAGA TTACCGACAG CCCGATGGTT GATCGTAATG AGAGTTTTAC CTTTGTCACC
GGCGTGAGCT GGCGTTTTTA A
 
Protein sequence
MLINRNIVAL FALPFMASAT ASELSIGAGA AYNESPYRGY NENTKAIPLI SYEGDSFYVR 
QTTLGFILSQ SEKNELSLTA SWMPLEFDPA DNDDYAMQQL DKRDSTAMAG VAWYHHERWG
TVKASAAADV LDNSNGWVGE LSVFHKMQIG RLSLTPALGV LYYDENFSDY YYGISESESR
RSGLASYSAQ DAWVPYVSLT AKYPIGEHVV LMASAGYSEL PEEITDSPMV DRNESFTFVT
GVSWRF