| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_3908 |
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| Symbol | |
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| ID | 6145753 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | + |
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| Start bp | 3977925 |
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| End bp | 3979325 |
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| Gene Length | 1401 bp |
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| Protein Length | 466 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 641618734 |
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| Product | sugar glycoside-pentoside-hexuronide family protein |
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| Protein accession | YP_001745873 |
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| Protein GI | 170680906 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2211] Na+/melibiose symporter and related transporters |
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| TIGRFAM ID | [TIGR00792] sugar (Glycoside-Pentoside-Hexuronide) transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.845629 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 49 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCTCTA CACCGATTAC TACCGCTGAT ATCGCTAAAG GTAAAATTGA CGATGCGTTA
TCTGTACGGG AAAAAATAGG CTACGGCCTG GGTGACGCAG GCGGCACCGT AATAACTTGC
CTGATCATGA ACTTTCTCAC CTTTTTCTAC ACCGACGTTT TTGGCTTAAC TCCGGCGCTG
GTCGGCACGC TGTTTATTGC ACTGCGCGTG TTTGATGCCA TCTCCGACCC GGTGATGGGC
GTCATTGCCG ACCGGACGCA AAGTCGCTGG GGGCGCTTTC GTCCGTGGCA GTTGTGGATT
GCCATTCCCA TCGGCATTAT CGGCATCCTG ACGTTCACCG TGCCAGATGC CAGCATGGGA
GTAAAAATCG CCTGGGCGTT CGGCACTTAC CTGCTCCTTT CAGTCGGTTA TACCGCCATC
AACGTGCCGT ACTGCGCGCT GATCAACACC ATGACCACCC GCCACAATGA AGTGATCTCC
TGCCAGTCCT GGCGATTCGT TCTCTGCGGC GTGGCGGGAT TTCTGGTTTC GGTAGGCTTA
CCGTGGATGG TAGATCTCTT CGGTCAGGGT AATGCCGCGC GCGGCTATCA ACTGGGCGTC
GGCGTGCTGT GCGCCATCGC TGTGGTGATG TTCCTGTGCT GTTTCTTCTG GGTTCGTGAA
CGGGTGCCAC TCTCCACAAT GGGGAAATTT ACCCTGCGCG AACATCTTGC CGGGCTGCGG
AACAACGACC AACTGCTGCT GATGCTGGTC ATGTCTTTCC TGCTGATTAA CGTCTTTAAT
ATTCGCGGCG GTGGGTATAT GTACTTCATT ACCTACGTCT TACAAGGCAG TACGGGCTAC
ACGTCGCTGT TCTTCACTAT GGTCACCTTC GCCTCCATTA TCGGCTCGGT GATTGTCAGC
CCGTTAACGC GGCGTTTCGA TACCGTCAAA ATTTATTACT ACACCAACCT GCTCCTCGCT
GCGCTGGCGG TGTTGATGTG GTTCCTGCCC TCCAGCCCGG CTTATCAAAC GCTGTGGCTG
GCGGTGATCC TCGGTAATGG CGTGATTCTT GGCTTCACAT TGCCATTGCA CTTCTCATTG
ATGGCCTTTG CCGATGACTA CGGCGAGTGG AAAACCCGCG TACGTTCTTC CGGCATGAAC
TTCGCCTTCA ATCTGTTTTT CATCAAGCTG GCCTGGGCCT CCAGCGCCGG GATCATCAGC
CTGCTGTTTA TTTTTGTCGC CTACCAGCCA GGCGTGGAAA ACCAGACCGC CAGTTCGCTT
GGCGGGATCA CAGCAATGGA AACATTGCTG CCTGCGCTGT TCCACCTGCT GCTGGCGATG
GCGATCCGCT TTTGCAAACT CAATAACCCT ATGATGTCAC GCATTGCTAG CGACCTGCGT
CAGCGTCATG TACAGCCTTA A
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| Protein sequence | MTSTPITTAD IAKGKIDDAL SVREKIGYGL GDAGGTVITC LIMNFLTFFY TDVFGLTPAL
VGTLFIALRV FDAISDPVMG VIADRTQSRW GRFRPWQLWI AIPIGIIGIL TFTVPDASMG
VKIAWAFGTY LLLSVGYTAI NVPYCALINT MTTRHNEVIS CQSWRFVLCG VAGFLVSVGL
PWMVDLFGQG NAARGYQLGV GVLCAIAVVM FLCCFFWVRE RVPLSTMGKF TLREHLAGLR
NNDQLLLMLV MSFLLINVFN IRGGGYMYFI TYVLQGSTGY TSLFFTMVTF ASIIGSVIVS
PLTRRFDTVK IYYYTNLLLA ALAVLMWFLP SSPAYQTLWL AVILGNGVIL GFTLPLHFSL
MAFADDYGEW KTRVRSSGMN FAFNLFFIKL AWASSAGIIS LLFIFVAYQP GVENQTASSL
GGITAMETLL PALFHLLLAM AIRFCKLNNP MMSRIASDLR QRHVQP
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