| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_3906 |
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| Symbol | sgbE |
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| ID | 6147141 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | + |
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| Start bp | 3976157 |
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| End bp | 3976852 |
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| Gene Length | 696 bp |
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| Protein Length | 231 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 641618732 |
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| Product | L-ribulose-5-phosphate 4-epimerase |
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| Protein accession | YP_001745871 |
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| Protein GI | 170682264 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0235] Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases |
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| TIGRFAM ID | [TIGR00760] L-ribulose-5-phosphate 4-epimerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 49 |
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| Fosmid unclonability p-value | 0.936688 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTTAGAGC AACTAAAAGC CGACGTGCTG GCGGCGAATC TGGCGCTTCC CGCTCACCAT
CTGGTGACGT TCACCTGGGG CAATGTCAGC GCGGTAGACG AAACGCGGCA ATGGATGGTA
ATCAAACCTT CCGGCGTCGA GTACGACGTG ATGACCGCCG ACGATATGGT GGTGGTTGAG
ATAGCCAGCG GTAAAGTGGT GGAAGGCAGC AAAAAGCCCT CGTCCGACAC GCCAACGCAT
CTGGCGCTTT ACCGTCGCTA TGCCGAAATT GGCGGTATTG TGCATACCCA CTCGCGCCAC
GCCACCATCT GGTCGCAGGC CGGGCTGGAT CTCCCCGCCT GGGGCACCAC GCACGCTGAT
TACTTCTATG GTGCCATCCC CTGCACGCGA CAGATGACCG CAGAGGAGAT CAACGGCGAG
TATGAATACC AGACCGGCGA AGTGATCATT AAAACCTTCG AAGAACGTGG GTTGAACCCG
GCACAAATCC CGGCTGTACT GGTGCATTCT CACGGCCCGT TCGCCTGGGG AAAAAACGCC
GCCGATGCGG TGCATAACGC CGTGGTGCTG GAAGAGTGCG CCTATATGGG CCTGTTCTCG
CGCCAGCTTG CACCGCTGCT CCCTGCGATG CAAAACGAAC TGCTGGATAA GCACTACCTG
CGTAAACATG GGGCCAATGC CTATTACGGG CAGTAA
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| Protein sequence | MLEQLKADVL AANLALPAHH LVTFTWGNVS AVDETRQWMV IKPSGVEYDV MTADDMVVVE
IASGKVVEGS KKPSSDTPTH LALYRRYAEI GGIVHTHSRH ATIWSQAGLD LPAWGTTHAD
YFYGAIPCTR QMTAEEINGE YEYQTGEVII KTFEERGLNP AQIPAVLVHS HGPFAWGKNA
ADAVHNAVVL EECAYMGLFS RQLAPLLPAM QNELLDKHYL RKHGANAYYG Q
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