Gene EcSMS35_3896 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_3896 
Symbol 
ID6142957 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp3967180 
End bp3967653 
Gene Length474 bp 
Protein Length157 aa 
Translation table11 
GC content53% 
IMG OID641618722 
Product4Fe-4S ferredoxin iron-sulfur binding domain-containing protein 
Protein accessionYP_001745861 
Protein GI170683893 
COG category[C] Energy production and conversion 
COG ID[COG1142] Fe-S-cluster-containing hydrogenase components 2 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones63 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCGGT TTATTATTGC GGATGCGACG AAATGTATCG GTTGCCGTAC CTGTGAAGTG 
GCTTGCGCAG TGTCGCATCA GGAGAATCAG GATTGCGCTG CGTTGTCACC AGACGAGTTT
ATTTCCCGTA TTCGTGTCAT TAAAGACCAC AGCTGGACCA CGGCAGTAGC CTGTCATCAG
TGTGAAGATG CACCGTGCGC GAATGTCTGC CCTGTTGACG CGATAAGCCG TGAACATGGG
CATATTTTCG TTGAACAATC ACGTTGCATT GGCTGTAAAA GCTGTATGCT GGCTTGCCCG
TTTGGTGCGA TGGAGGTCGT TTCTTCGCGC AAAAAGGCGA GGGCGATTAA GTGCGATCTG
TGCTGGCATC GGGCGACGGG ACCGGCCTGT GTTGAAGCCT GCCCGACAAA GGCGTTGCAG
TGCATGGATG TCGAGAAAGT GCAGCGGCAT CGGCTACGAC AGCAGTCTGT TTGA
 
Protein sequence
MNRFIIADAT KCIGCRTCEV ACAVSHQENQ DCAALSPDEF ISRIRVIKDH SWTTAVACHQ 
CEDAPCANVC PVDAISREHG HIFVEQSRCI GCKSCMLACP FGAMEVVSSR KKARAIKCDL
CWHRATGPAC VEACPTKALQ CMDVEKVQRH RLRQQSV