| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_3862 |
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| Symbol | dppB |
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| ID | 6144257 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | - |
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| Start bp | 3931243 |
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| End bp | 3932262 |
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| Gene Length | 1020 bp |
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| Protein Length | 339 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 641618688 |
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| Product | dipeptide transporter permease DppB |
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| Protein accession | YP_001745828 |
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| Protein GI | 170681195 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 63 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTGCAGT TTATTCTCCG ACGTTTGGGA CTCGTCATCC CCACGTTTAT CGGTATTACC
CTTCTCACAT TTGCCTTTGT CCACATGATC CCGGGCGATC CGGTGATGAT CATGGCGGGC
GAGCGTGGGA TCTCCCCAGA GCGTCACGCG CAATTGCTGG CTGAACTCGG CTTAGATAAA
CCGATGTGGC AGCAGTATCT CCATTACATT TGGGGCGTAA TGCACGGTGA TTTAGGCATT
TCCATGAAAA GCCGAATTCC GGTATGGGAA GAGTTCGTGC CGCGCTTTCA GGCTACGCTG
GAACTTGGCG TCTGCGCGAT GATTTTTGCG ACGGCAGTCG GTATTCCGGT TGGTGTGCTG
GCTGCGGTTA AACGTGGTTC CATTTTCGAT CACACAGCGG TTGGCCTGGC GCTGACCGGC
TACTCGATGC CAATTTTCTG GTGGGGCATG ATGCTGATCA TGCTGGTTTC GGTGCACTGG
AACCTGACGC CTGTCTCCGG TCGTGTGAGC GACATGGTGT TCCTCGATGA TTCCAATCCG
TTAACCGGTT TTATGCTGAT CGACACCGCC ATCTGGGGTG AAGACGGTAA CTTTATCGAT
GCCGTCGCCC ATATGATCCT ACCCGCCATT GTGCTGGGTA CCATCCCGCT GGCGGTCATT
GTGCGTATGA CGCGCTCCTC GATGCTGGAA GTGCTGGGCG AAGATTATAT CCGCACCGCG
CGTGCCAAAG GTCTTACCCG GATGCGGGTG ATTATCGTCC ATGCGCTGCG TAACGCGATG
CTGCCGGTGG TGACCGTTAT CGGCCTGCAG GTGGGAACAT TGCTGGCGGG GGCGATTCTG
ACTGAAACCA TCTTCTCGTG GCCCGGTCTG GGGCGTTGGT TGATTGACGC ACTGCAACGC
CGCGATTATC CGGTAGTGCA GGGCGGCGTA TTGCTGGTGG CGACGATGAT TATCCTCGTC
AACCTGCTGG TCGATTTGCT GTACGGCGTG GTGAACCCGC GTATTCGTCA TAAGAAGTAA
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| Protein sequence | MLQFILRRLG LVIPTFIGIT LLTFAFVHMI PGDPVMIMAG ERGISPERHA QLLAELGLDK
PMWQQYLHYI WGVMHGDLGI SMKSRIPVWE EFVPRFQATL ELGVCAMIFA TAVGIPVGVL
AAVKRGSIFD HTAVGLALTG YSMPIFWWGM MLIMLVSVHW NLTPVSGRVS DMVFLDDSNP
LTGFMLIDTA IWGEDGNFID AVAHMILPAI VLGTIPLAVI VRMTRSSMLE VLGEDYIRTA
RAKGLTRMRV IIVHALRNAM LPVVTVIGLQ VGTLLAGAIL TETIFSWPGL GRWLIDALQR
RDYPVVQGGV LLVATMIILV NLLVDLLYGV VNPRIRHKK
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