Gene EcSMS35_3774 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_3774 
Symbol 
ID6146312 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp3837295 
End bp3838419 
Gene Length1125 bp 
Protein Length374 aa 
Translation table11 
GC content55% 
IMG OID641618600 
ProductABC transporter, ATP-binding protein 
Protein accessionYP_001745740 
Protein GI170683726 
COG category[V] Defense mechanisms 
COG ID[COG0842] ABC-type multidrug transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones62 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCCATT TACGCAATAT TTTTAATCTG GGTATCAAAG AGTTGCGCAG TTTGCTCGGT 
GATAAAGCGA TGCTGACGCT GATTGTCTTC TCGTTTACGG TGTCGGTGTA TTCGTCAGCG
ACCGTTACGC CAGGATCGTT GAACCTCGCG CCGATCGCCA TTGCCGATAT GGATCAATCG
CAGTTATCGA ACAGGATCGT TAACAGCTTC TATCGCCCGT GGTTTTTGCC ACCGGAGATG
ATCACCGCCG ATGAGATGGA TGCCGGGCTG GACGCCGGAC GCTATACCTT CGCGATAAAT
ATTCCGCCTA ATTTTCAGCG TGATGTCCTC GCCGGACGCC AGCCAGATAT TCAGGTGAAC
GTCGATGCCA CGCGCATGAG CCAGGCATTT ACCGGCAACG GGTATATCCA GAATATTATC
AACGGTGAAG TGAACAGCTT TGTCGCGCGC TACCGTGATA ACAGCGAACC GTTGGTATCG
CTGGAAACCC GGATGCGCTT TAACCCGAAC CTCGATCCCG CGTGGTTTGG CGGGGTGATG
GCGATCATCA ACAACATTAC CATGCTGGCG ATTGTGTTGA CCGGATCGGC ACTGATCCGC
GAGCGTGAAC ACGGCACGGT GGAACACTTA CTGGTGATGC CGATAACGCC GTTTGAGATC
ATGATGGCAA AGGTCTGGTC GATGGGGCTG GTGGTGCTGG TGGTGTCGGG ATTATCGCTG
GTGCTGATGG TGAAAGGTGT ACTGGGTGTA CCGATTGAAG GCTCGATCCC GCTGTTTATG
CTGGGCGTGG CGCTCAGTCT GTTTGCCACC ACGTCAATCG GCATTTTTAT GGGGACGATA
GCGCGTTCAA TGCCGCAACT GGGGCTGCTG GTGATTCTGG TGCTGCTGCC GCTGCAAATG
CTTTCCGGTG GCTCCACGCC GCGCGAAAGT ATGCCGCAGA TGGTGCAGGA CATTATGTTG
ACCATGCCGA CGACACACTT TGTCAGCCTC GCGCAGGCCA TTCTCTACCG TGGTGCCGGA
TTCGAAATCG TCTGGCCGCA GTTCCTGACG CTGATGGCAA TTGGCGGCGC GTTTTTTACC
ATTGCGCTGC TGCGATTCAG GAAGACGATT GGGACAATGG CGTAA
 
Protein sequence
MRHLRNIFNL GIKELRSLLG DKAMLTLIVF SFTVSVYSSA TVTPGSLNLA PIAIADMDQS 
QLSNRIVNSF YRPWFLPPEM ITADEMDAGL DAGRYTFAIN IPPNFQRDVL AGRQPDIQVN
VDATRMSQAF TGNGYIQNII NGEVNSFVAR YRDNSEPLVS LETRMRFNPN LDPAWFGGVM
AIINNITMLA IVLTGSALIR EREHGTVEHL LVMPITPFEI MMAKVWSMGL VVLVVSGLSL
VLMVKGVLGV PIEGSIPLFM LGVALSLFAT TSIGIFMGTI ARSMPQLGLL VILVLLPLQM
LSGGSTPRES MPQMVQDIML TMPTTHFVSL AQAILYRGAG FEIVWPQFLT LMAIGGAFFT
IALLRFRKTI GTMA