| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_3761 |
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| Symbol | nikB |
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| ID | 6143337 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | + |
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| Start bp | 3826989 |
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| End bp | 3827933 |
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| Gene Length | 945 bp |
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| Protein Length | 314 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 641618587 |
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| Product | nickel transporter permease NikB |
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| Protein accession | YP_001745727 |
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| Protein GI | 170682486 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | [TIGR02789] nickel ABC transporter, permease subunit NikB |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 63 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTGCGTT ATGTATTACG CCGCTTTCTG CTGCTGATCC CGATGGTGCT CGCCGCCTCG
GTGATCATTT TTCTGATGCT GCGCCTCGGC ACCGGCGACC CGGCGCTCGA TTATCTGCGT
CTGTCTAACC TGCCGCCGAC GCCGGAAATG CTGGCTTCTA CCCGCACCAT GCTGGGGCTG
GATCAGCCGT TGTACGTGCA GTACGGAACC TGGTTGTGGA AAGCGCTGCA TCTTGACTTT
GGTATCTCAT TCGCCAGCCA ACGCCCGGTG CTGGACGATA TGCTGACCTT CCTGCCCGCC
ACGCTGGAGC TGGCGGGTGC GGCGCTGGTA TTAATTCTGC TCACTTCCGT GCCGCTCGGC
ATCTGGGCGG CGCGCCATCG CGACCGCCTG CCGGATTTCG CCGTGCGTTT TATCGCGTTT
CTTGGCGTGT CGATGCCTAA CTTCTGGTTG GCGTTTTTAC TGGTGATGGC ATTTTCAGTG
TATCTGCAAT GGCTGCCCGC GATGGGTTAC GGCGGCTGGC AGCACATCAT TTTGCCTGCG
GTTTCCATCG CTTTTATGTC GCTGGCGATT AACGCGCGTC TGCTGCGCGC CAGTATGCTG
GACGTCGCCG GTCAGCGTCA TGTGACCTGG GCGCGACTGC GCGGCCTGAA CGACAAACAG
ACCGAACGCC GCCACATCCT GCGCAATGCC TCGCTGCCGA TGATCACCGC CGTGGGGATG
CACATTGGCG AACTGATTGG CGGGACGATG ATTATCGAAA ACATCTTTGC CTGGCCGGGC
GTCGGGCGCT ATGCGGTGTC GGCGATTTTC AACCGTGACT ATCCGGTGAT CCAGTGCTTT
ACGCTGATGA TGGTGGTGGT TTTTGTGGTC TGTAATTTGA TTGTCGATTT GCTCAACGCC
GCGCTGGACC CACGTATTCG TCGTCATGAA GGAGCCCACG CGTGA
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| Protein sequence | MLRYVLRRFL LLIPMVLAAS VIIFLMLRLG TGDPALDYLR LSNLPPTPEM LASTRTMLGL
DQPLYVQYGT WLWKALHLDF GISFASQRPV LDDMLTFLPA TLELAGAALV LILLTSVPLG
IWAARHRDRL PDFAVRFIAF LGVSMPNFWL AFLLVMAFSV YLQWLPAMGY GGWQHIILPA
VSIAFMSLAI NARLLRASML DVAGQRHVTW ARLRGLNDKQ TERRHILRNA SLPMITAVGM
HIGELIGGTM IIENIFAWPG VGRYAVSAIF NRDYPVIQCF TLMMVVVFVV CNLIVDLLNA
ALDPRIRRHE GAHA
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