| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_3760 |
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| Symbol | nikA |
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| ID | 6144357 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | + |
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| Start bp | 3825415 |
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| End bp | 3826989 |
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| Gene Length | 1575 bp |
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| Protein Length | 524 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 641618586 |
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| Product | nickel ABC transporter, periplasmic nickel-binding protein NikA |
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| Protein accession | YP_001745726 |
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| Protein GI | 170684038 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | [TIGR02294] nickel ABC transporter, periplasmic nickel-binding protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 61 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCTCTA CACTCCGCCG CACTCTATTT GCGCTGCTGG CTTGTGCGTC TTTTATCGTC
CATGCCGCTG CACCAGATGA AATCACCACC GCCTGGCCGG TGAATGTCGG GCCACTAAAC
CCGCACCTTT ACACGCCTAA CCAAATGTTC GCCCAGAGCA TGGTTTATGA ACCACTGGTG
AAATATCAGG CAGACGGTTC GGTGATCCCG TGGCTGGCAA AAAGCTGGAC CCATTCAGAA
GATGGCAAAA CCTGGACCTT CACCCTGCGT GATGATGTGA AATTCTCTAA CGGTGAACCG
TTTGATGCAG AGGCCGCGGC AGAAAACTTC CGCGCTGTGC TCGACAACCG TCAACGTCAC
GCCTGGCTGG AGCTGGCAAA CCAGATTGTT GATGTCAAAG CACTCAGCAA AAACGAGCTG
CAAATCACCC TGAAAAGCGC CTACTATCCT TTCCTGCAAG AACTGGCCCT GCCGCGCCCT
TTCCGCTTTA TCGCCCCCTC GCAGTTTAAA AACCATGAAA CCATGAATGG GATTAAAGCG
CCGATTGGCA CCGGGCCGTG GGTTTTGCAG GAATCGAAAC TGAATCAGTA CGATGTCTTC
GTCCGTAACG AAAACTACTG GGGCGAAAAG CCGGCGATTA AGAAGATCAC TTTTAACGTC
ATCCCAGACC CGACTACCCG CGCAGTAGCG TTTGAAACCG GCGATATCGA TCTACTATAC
GGTAATGAAG GGCTATTACC GCTCGATACC TTCGCCCGCT TTAGCCAGAA CTCGGCTTAC
CACACCCAAC TGTCACAGCC GATCGAAACC GTGATGCTGG CGCTCAATAC TGCCAAAGCC
CCCACCAACG AGCTGGCCGT ACGTGAAGCT CTCAATTACG CGGTAAACAA AAAATCGCTG
ATCGATAACG CGTTGTATGG CACCCAGCAG GTCGCCGACA CCCTGTTTGC CCCTTCCGTG
CCCTATGCCA ATCTCGGCCT GAAACCGCGC CAGTACGATC CGCAGAAAGC GAAAGCGTTG
CTGGAACAAG CAGGCTGGAC GCTGCCCGCA GGCAAAGACA TCCGCGAGAA AAATGGTCAG
CCGCTGCGCA TTGAACTGTC GTTCATCGGC ACCGATGCGT TAAGCAAATC AATGGCCGAA
ATCATTCAGG CTGATATGCG CCAGATTGGC GCGGATGTCA CGCTGATCGG CGAAGAAGAG
AGCAGTATCT ATGCTCGTCA GCGCGACGGT CGTTTTGGCA TGATTTTCCA CCGTACCTGG
GGCGCGCCAT ACGATCCACA CGCCTTCCTG AGTTCAATGC GCGTACCGTC GCACGCTGAC
TTCCAGGCAC AGCAAGGTTT AGCCGACAAG CCACTGATTG ATAAAGAGAT TGGCGAAGTG
CTGGCGACAC ACGACGAAAC ACAACGTCAG GCACTGTATC GCGACATTCT GACCCGTCTG
CATAACGAGG CGGTTTATCT GCCCATCAGC TATATCTCAA TGATGGTGGT TTCAAAACCG
GAACTGGGTA ACATCCCCTA CGCGCCGATC GCCACCGAAA TCCCGTTCGA ACAGATTAAA
CCGGTGAAAC CTTAA
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| Protein sequence | MFSTLRRTLF ALLACASFIV HAAAPDEITT AWPVNVGPLN PHLYTPNQMF AQSMVYEPLV
KYQADGSVIP WLAKSWTHSE DGKTWTFTLR DDVKFSNGEP FDAEAAAENF RAVLDNRQRH
AWLELANQIV DVKALSKNEL QITLKSAYYP FLQELALPRP FRFIAPSQFK NHETMNGIKA
PIGTGPWVLQ ESKLNQYDVF VRNENYWGEK PAIKKITFNV IPDPTTRAVA FETGDIDLLY
GNEGLLPLDT FARFSQNSAY HTQLSQPIET VMLALNTAKA PTNELAVREA LNYAVNKKSL
IDNALYGTQQ VADTLFAPSV PYANLGLKPR QYDPQKAKAL LEQAGWTLPA GKDIREKNGQ
PLRIELSFIG TDALSKSMAE IIQADMRQIG ADVTLIGEEE SSIYARQRDG RFGMIFHRTW
GAPYDPHAFL SSMRVPSHAD FQAQQGLADK PLIDKEIGEV LATHDETQRQ ALYRDILTRL
HNEAVYLPIS YISMMVVSKP ELGNIPYAPI ATEIPFEQIK PVKP
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