| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_3714 |
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| Symbol | glgB |
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| ID | 6143963 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | - |
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| Start bp | 3781702 |
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| End bp | 3783888 |
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| Gene Length | 2187 bp |
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| Protein Length | 728 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 641618540 |
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| Product | glycogen branching enzyme |
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| Protein accession | YP_001745680 |
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| Protein GI | 170680453 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0296] 1,4-alpha-glucan branching enzyme |
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| TIGRFAM ID | [TIGR01515] alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.470927 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 46 |
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| Fosmid unclonability p-value | 0.781278 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGATC GTATCGATAG AGACGTGATT AACGCGCTAA TTGCAGGCCA TTTTGCGGAT
CCTTTTTCCG TACTGGGGAT GCATAAAACC ACCGCGGGAC TGGAAGTCCG TGCCCTTTTA
CCCGACGCTA CCGATGTGTG GGTGATTGAA CCGAAAACCG GGCGCAAACT CGCAAAACTG
GAGTGTCTCG ACTCCCGTGG ATTCTTTAGC GGTGTCATTC CGCGACGTAA GAATTTTTTC
CGCTATCAGT TGGCTGTTGT CTGGCATGGT CAGCAAAACC TGATAGATGA TCCTTACCGT
TTTGGTCCGC TAATCCAGGA AATGGATGCC TGGCTATTAT CTGAAGGTAC TCACCTGCGC
CCGTATGAAA CCTTAGGCGC GCATGCAGAT ACTATGGATG GCGTCACAGG TACGCGTTTT
TCTGTCTGGG CTCCAAACGC CCGTCGGGTC TCGGTGGTTG GGCAATTCAA CTACTGGGAC
GGTCGCCGTC ATCCGATGCG CCTGCGTAAA GAGAGCGGCA TCTGGGAACT GTTTATCCCT
GGGGCGCATA ACGGTCAGCT CTATAAATAC GAGATGATTG ATGCCAATGG CAACTTGCGT
CTGAAGTCCG ACCCTTATGC CTTCGAAGCG CAAATGCGCC CGGAAACCGC GTCTCTTATT
TGCGGGCTGC CGAAAAAGGT TGTACAGACT GAAGAGCGCA AAAAAGCGAA TCAGTTTGAT
GCGCCAATCT CTATTTATGA AGTTCACCTG GGCTCCTGGC GTCGCCACAC CGACAACAAT
TTCTGGTTAA GCTACCGCGA GCTGGCCGAT CAACTTGTGC CTTATGCTAA ATGGATGGGC
TTTACCCATC TCGAGCTACT GCCCATTAAC GAGCATCCGT TCGATGGCAG TTGGGGTTAT
CAGCCAACCG GCCTGTATGC ACCGACCCGC CGTTTTGGTA CCCGCGACGA CTTCCGTTAT
TTCATTGATG CCGCACACGC AGCTGGTCTG AACGTGATTC TCGACTGGGT GCCAGGCCAC
TTCCCGACCG ATGACTTTGC GCTTGCCGAA TTTGATGGCA CGAACTTGTA TGAACACAGC
GATCCGCGCG AAGGCTATCA TCAGGACTGG AACACGCTGA TCTACAACTA TGGTCGCCGT
GAAGTCAGTA ACTTCCTTGT CGGTAACGCG CTTTACTGGA TCGAACGTTT TGGTATTGAT
GCGCTGCGCG TCGATGCGGT GGCGTCAATG ATTTATCGCG ACTACAGCCG TAAAGAGGGG
GAGTGGATCC CGAACGAATT TGGCGGTCGC GAGAATCTTG AAGCGATTGA ATTCTTGCGT
AATACCAACC GTATTCTTGG TGAGCAGGTT TCCGGTGCAG TGACAATGGC GGAGGAGTCT
ACCGATTTCC CTGGCGTTTC TCGTCCGCAG GACATGGGCG GTCTGGGCTT CTGGTACAAG
TGGAACCTCG GCTGGATGCA TGACACCCTG GACTACATGA AGCTCGACCC AGTTTATCGT
CAGTATCATC ACGATAAACT GACCTTCGGG ATGCTCTACA ACTACACTGA AAACTTCGTC
CTGCCGTTGT CGCATGATGA AGTGGTCCAC GGTAAAAAAT CGATTCTCGA CCGGATGCCG
GGCGACGCAT GGCAGAAATT CGCTAACCTG CGCGCCTACT ACGGCTGGAT GTGGGCATTC
CCGGGCAAGA AATTGCTGTT CATGGGGAAC GAATTTGCCC AGGGCCGCGA GTGGAACCAT
GACGCCAGCC TCGACTGGCA TCTGTTGGAA GGCGGCGATA ACTGGCACCA CGGTGTCCAG
CGTCTGGTGC GCGATCTGAA CCTCACCTAC CGCCACCATA AAGCAATGCA TGAACTGGAT
TTTGACCCGT ACGGCTTTGA ATGGCTGGTG GTGGATGACA AAGAACGCTC GGTGCTGATC
TTTGTGCGTC GCGATAAAGA GGGTAACGAA ATCATCGTTG CCAGTAACTT TACTCCGGTG
CCGCGTCATG ATTATCGCTT CGGCATTAAC CAGCCGGGTA AATGGCGTGA GATCCTCAAT
ACCGATTCCA TGCACTATCA CGGCAGTAAT GCAGGCAATG GCGGCACGGT ACACAGCGAT
GAGATTGCCA GCCACGGTCG TCAGCATTCA CTAAGCCTGA CGCTACCACC TCTGGCCACT
ATCTGGCTGG TTCGGGAGGC AGAATGA
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| Protein sequence | MSDRIDRDVI NALIAGHFAD PFSVLGMHKT TAGLEVRALL PDATDVWVIE PKTGRKLAKL
ECLDSRGFFS GVIPRRKNFF RYQLAVVWHG QQNLIDDPYR FGPLIQEMDA WLLSEGTHLR
PYETLGAHAD TMDGVTGTRF SVWAPNARRV SVVGQFNYWD GRRHPMRLRK ESGIWELFIP
GAHNGQLYKY EMIDANGNLR LKSDPYAFEA QMRPETASLI CGLPKKVVQT EERKKANQFD
APISIYEVHL GSWRRHTDNN FWLSYRELAD QLVPYAKWMG FTHLELLPIN EHPFDGSWGY
QPTGLYAPTR RFGTRDDFRY FIDAAHAAGL NVILDWVPGH FPTDDFALAE FDGTNLYEHS
DPREGYHQDW NTLIYNYGRR EVSNFLVGNA LYWIERFGID ALRVDAVASM IYRDYSRKEG
EWIPNEFGGR ENLEAIEFLR NTNRILGEQV SGAVTMAEES TDFPGVSRPQ DMGGLGFWYK
WNLGWMHDTL DYMKLDPVYR QYHHDKLTFG MLYNYTENFV LPLSHDEVVH GKKSILDRMP
GDAWQKFANL RAYYGWMWAF PGKKLLFMGN EFAQGREWNH DASLDWHLLE GGDNWHHGVQ
RLVRDLNLTY RHHKAMHELD FDPYGFEWLV VDDKERSVLI FVRRDKEGNE IIVASNFTPV
PRHDYRFGIN QPGKWREILN TDSMHYHGSN AGNGGTVHSD EIASHGRQHS LSLTLPPLAT
IWLVREAE
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