| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_3704 |
|---|
| Symbol | |
|---|
| ID | 6143117 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli SMS-3-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010498 |
|---|
| Strand | - |
|---|
| Start bp | 3768154 |
|---|
| End bp | 3768984 |
|---|
| Gene Length | 831 bp |
|---|
| Protein Length | 276 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 641618531 |
|---|
| Product | intramembrane serine protease GlpG |
|---|
| Protein accession | YP_001745671 |
|---|
| Protein GI | 170683698 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0705] Uncharacterized membrane protein (homolog of Drosophila rhomboid) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 40 |
|---|
| Fosmid unclonability p-value | 0.144478 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTGATGA TTACCTCTTT TGCTAACCCC CGAGTGGCGC AGGCGTTTGT TGATTACATG
GCGACGCAGG GTGTTATCCT CACGATTCAA CAACATAACC AAAGCGATGT CTGGCTAGCG
GATGAGTCCC AGGCCGAACG CGTGCGGGCG GAGCTGGCGC GTTTTCTCGA AAACCCGGCA
GATCCGCGTT ATCTGGCGGC CAGCTGGCAG GCGGGCCATA CCGGCAGTGG CCTGCATTAT
CGCCGTTATC CTTTCTTTGC TGCCTTGCGT GAACGCGCAG GTCCGGTAAC CTGGGTGATG
ATGATTGCCT GCGTGGTGGT GTTTATCGCC ATGCAAATTC TCGGCGATCA GGAAGTGATG
TTATGGCTGG CCTGGCCATT CGATCCGACG CTGAAATTTG AGTTCTGGCG TTACTTCACC
CACGCGTTAA TGCACTTCTC GCTGATGCAT ATCCTCTTTA ACCTGCTCTG GTGGTGGTAT
CTCGGCGGTG CGGTGGAAAA ACGCCTCGGT AGCGGTAAGC TAATTGTCAT TACTCTCATT
AGCGCCCTGT TAAGCGGCTA TGTGCAGCAA AAATTCAGCG GGCCGTGGTT TGGCGGGCTT
TCTGGCGTGG TGTATGCGCT GATGGGCTAC GTCTGGCTAC GTGGCGAACG CGATCCGCAA
AGTGGCATTT ACCTGCAACG TGGGTTAATT ATCTTTGCGT TGATCTGGAT TGTCGCCGGA
TGGTTTGATT TGTTTGGGAT GTCGATGGCG AACGGAGCAC ACATCGCCGG GTTAGCCGTG
GGTTTAGCGA TGGCTTTTGT TGATTCGCTC AATGCGCGAA AACGAAAATA A
|
|---|
| Protein sequence | MLMITSFANP RVAQAFVDYM ATQGVILTIQ QHNQSDVWLA DESQAERVRA ELARFLENPA
DPRYLAASWQ AGHTGSGLHY RRYPFFAALR ERAGPVTWVM MIACVVVFIA MQILGDQEVM
LWLAWPFDPT LKFEFWRYFT HALMHFSLMH ILFNLLWWWY LGGAVEKRLG SGKLIVITLI
SALLSGYVQQ KFSGPWFGGL SGVVYALMGY VWLRGERDPQ SGIYLQRGLI IFALIWIVAG
WFDLFGMSMA NGAHIAGLAV GLAMAFVDSL NARKRK
|
|---|
| |