Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_3637 |
Symbol | |
ID | 6142719 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | + |
Start bp | 3696620 |
End bp | 3697489 |
Gene Length | 870 bp |
Protein Length | 289 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 641618464 |
Product | phosphoribulokinase/uridine kinase family protein |
Protein accession | YP_001745604 |
Protein GI | 170683032 |
COG category | [C] Energy production and conversion |
COG ID | [COG3954] Phosphoribulokinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.0000784787 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTCTGCCA AACATCCGGT CATTGCGGTA ACAGGATCCA GCGGCGCGGG GACCACCACC ACCAGCCTCG CGTTTCGTAA AATATTCGCG CAGTTAAATC TGCATGCAGC CGAGGTGGAA GGTGACAGTT TTCACCGTTA CACCCGCCCG GAAATGGACA TGGCGATCCG CAAAGCGCGC GACGCCGGGC GGCATATCAG CTACTTCGGC CCCGAAGCGA ACGACTTCGG CCTGCTGGAA CAAACCTTCA TTGAATACGG TCAGAGCGGC AAAGGGAAAT CTCGCAAATA TCTGCATACC TACGACGAAG CCGTACCGTG GAATCAGGTA CCGGGGACAT TCACCCCATG GCAACCTTTA CCGGAACCCA CTGATGTACT GTTTTATGAA GGTTTACACG GCGGCGTCGT CACGCCACAG CATAACGTTG CGCAGCATGT GGATTTACTG GTCGGCGTGG TGCCTATCGT TAACCTTGAG TGGATTCAAA AATTGATCCG CGACACCAGC GAGCGCGGGC ACTCACGAGA AGCAGTGATG GACTCAGTAG TGCGCTCAAT GGAAGACTAT ATCAACTACA TCACACCGCA GTTTTCCCGC ACCCATCTTA ACTTCCAGCG CGTTCCCACC GTCGACACCT CAAACCCGTT CGCGGCAAAA GGTATCCCGT CGCTGGATGA AAGCTTTGTG GTGATCCATT TTCGTAATCT GGAAGGGATC GATTTCCCCT GGCTGCTGGC GATGTTGCAG GGCTCATTCA TTTCCCACAT CAATACGTTA GTGGTGCCCG GCGGCAAAAT GGGTCTGGCA ATGGAATTAA TTATGCTGCC GCTGGTGCAA CGATTGATGG AAGGAAAGAA AATCGAGTAA
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Protein sequence | MSAKHPVIAV TGSSGAGTTT TSLAFRKIFA QLNLHAAEVE GDSFHRYTRP EMDMAIRKAR DAGRHISYFG PEANDFGLLE QTFIEYGQSG KGKSRKYLHT YDEAVPWNQV PGTFTPWQPL PEPTDVLFYE GLHGGVVTPQ HNVAQHVDLL VGVVPIVNLE WIQKLIRDTS ERGHSREAVM DSVVRSMEDY INYITPQFSR THLNFQRVPT VDTSNPFAAK GIPSLDESFV VIHFRNLEGI DFPWLLAMLQ GSFISHINTL VVPGGKMGLA MELIMLPLVQ RLMEGKKIE
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