Gene EcSMS35_3604 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_3604 
SymbolrplX 
ID6142926 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp3674688 
End bp3675002 
Gene Length315 bp 
Protein Length104 aa 
Translation table11 
GC content46% 
IMG OID641618431 
Product50S ribosomal protein L24 
Protein accessionYP_001745571 
Protein GI170682364 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0198] Ribosomal protein L24 
TIGRFAM ID[TIGR01079] ribosomal protein L24, bacterial/organelle 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value1.61475e-06 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value0.0245278 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGCGA AAATCCGTCG TGATGACGAA GTTATCGTGT TAACCGGTAA AGATAAAGGT 
AAACGCGGTA AAGTTAAGAA TGTCCTGTCT TCCGGCAAGG TCATTGTTGA AGGTATCAAC
CTGGTTAAGA AACATCAGAA GCCGGTTCCG GCCCTGAACC AACCGGGTGG CATCGTTGAA
AAAGAAGCCG CTATTCAGGT TTCCAACGTA GCAATCTTCA ATGCGGCAAC CGGCAAGGCT
GACCGTGTAG GCTTTAGATT CGAAGACGGT AAAAAAGTCC GTTTCTTCAA GTCTAACAGC
GAAACTATCA AGTAA
 
Protein sequence
MAAKIRRDDE VIVLTGKDKG KRGKVKNVLS SGKVIVEGIN LVKKHQKPVP ALNQPGGIVE 
KEAAIQVSNV AIFNAATGKA DRVGFRFEDG KKVRFFKSNS ETIK