| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_3600 |
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| Symbol | rplF |
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| ID | 6144688 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | - |
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| Start bp | 3672842 |
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| End bp | 3673375 |
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| Gene Length | 534 bp |
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| Protein Length | 177 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 641618427 |
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| Product | 50S ribosomal protein L6 |
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| Protein accession | YP_001745567 |
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| Protein GI | 170680532 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0097] Ribosomal protein L6P/L9E |
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| TIGRFAM ID | [TIGR03654] ribosomal protein L6, bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.00731053 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 0.0167726 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCTCGTG TTGCTAAAGC ACCGGTCGTT GTTCCTGCCG GCGTTGATGT AAAAATCAAC
GGTCAGGTTA TTACGATCAA AGGTAAAAAC GGCGAGCTGA CTCGTACTCT CAACGATGCT
GTTGAAGTTA AACATGCAGA TAATACCCTG ACCTTCGGTC CGCGTGATGG TTACGCAGAC
GGTTGGGCAC AGGCTGGTAC CGCGCGTGCC CTGCTGAACT CAATGGTTAT CGGTGTTACC
GAAGGCTTCA CTAAGAAGCT GCAGCTGGTT GGTGTAGGTT ACCGTGCAGC GGTTAAAGGC
AATGTGATTA ACCTGTCTCT GGGTTTCTCT CATCCTGTTG ACCATCAGCT GCCTGCGGGT
ATCACTGCTG AATGTCCGAC TCAGACTGAA ATCGTGCTGA AAGGCGCTGA TAAGCAGGTG
ATTGGCCAGG TTGCAGCGGA TCTGCGCGCC TACCGTCGTC CTGAGCCTTA CAAAGGCAAG
GGTGTTCGTT ACGCCGACGA AGTCGTGCGT ACCAAAGAGG CTAAGAAGAA GTAA
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| Protein sequence | MSRVAKAPVV VPAGVDVKIN GQVITIKGKN GELTRTLNDA VEVKHADNTL TFGPRDGYAD
GWAQAGTARA LLNSMVIGVT EGFTKKLQLV GVGYRAAVKG NVINLSLGFS HPVDHQLPAG
ITAECPTQTE IVLKGADKQV IGQVAADLRA YRRPEPYKGK GVRYADEVVR TKEAKKK
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