| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_3578 |
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| Symbol | |
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| ID | 6146738 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | - |
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| Start bp | 3658078 |
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| End bp | 3658650 |
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| Gene Length | 573 bp |
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| Protein Length | 190 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 641618405 |
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| Product | putative ribosome maturation factor |
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| Protein accession | YP_001745545 |
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| Protein GI | 170683354 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0009] Putative translation factor (SUA5) |
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| TIGRFAM ID | [TIGR00057] Sua5/YciO/YrdC/YwlC family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.000356689 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 0.210928 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGAATAATA ACCTGCAAGG AGACGCTATC GCAGCTGCGA TAGATGTCCT CAATGAAGAA
CGTGTCATCG CCTATCCAAC GGAAGCCGTT TTCGGTGTCG GGTGCGATCC TGATAGCGAA
ACAGCAGTGA TGCGACTGTT GGAGTTAAAA CAGCGTCCGG TTGATAAGGG GCTGATTCTA
ATCGCCGCAA ATTACGAGCA GCTTAAACCC TATATTGATG ACACCATGCT GACTGACGCG
CAGCGTGAAA CTATATTTTC TCGCTGGCCA GGTCCTGTCA CCTTTGTTTT TCCCGCGCCT
GCGACAACAC CGCGCTGGTT GACGGGCCGC TTTGATTCGC TTGCTGTACG AGTCACCGAC
CATCCGTTGG TGGTTGCTTT GTGCCAGGCT TATGGTAAAC CGCTGGTTTC TACCAGTGCC
AACTTGAGTG GATTGCCGCC TTGTCGAACA GTAGACGAAG TTCGCGCACA ATTTGGCGCG
GCGTTCCCGG TTGTGCCTGG TGAAACGGGG GGGCGTTTAA ATCCTTCAGA AATCCGCGAT
GCCCTGACGG GTGAACTGTT TCGACAGGGG TAA
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| Protein sequence | MNNNLQGDAI AAAIDVLNEE RVIAYPTEAV FGVGCDPDSE TAVMRLLELK QRPVDKGLIL
IAANYEQLKP YIDDTMLTDA QRETIFSRWP GPVTFVFPAP ATTPRWLTGR FDSLAVRVTD
HPLVVALCQA YGKPLVSTSA NLSGLPPCRT VDEVRAQFGA AFPVVPGETG GRLNPSEIRD
ALTGELFRQG
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