Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_3560 |
Symbol | acrE |
ID | 6142985 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | + |
Start bp | 3641264 |
End bp | 3642421 |
Gene Length | 1158 bp |
Protein Length | 385 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 641618389 |
Product | acriflavine resistance protein E |
Protein accession | YP_001745536 |
Protein GI | 170683539 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0845] Membrane-fusion protein |
TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0550362 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 50 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGAAAC ATGCCAGGTT TTTCCTCCTG CCCTCCTTTA TTCTGATCTC CGCGGCTTTA ATCGCCGGTT GTAACGATAA GGGAGAAGAG AAAGCTCACG TCGGTGAACC GCAGGTTACC GTTCATATTG TGAAAACGGC CCCGTTAGAA GTTAAGACTG AATTACCAGG CCGCACCAAT GCTTACCGTA TAGCCGAAGT TCGCCCACAG GTTAGCGGGA TCGTACTGAG TCGCAATTTC ACTGAAGGCA GCGATGTGCA AGCAGGCCAG TCTCTGTACC AGATCGATCC CGCGACCTAT CAGGCAAGTT ATGACAGCGC GAAAGGCGAA CTGGCGAAAA GTGAAGCCGC CGCCGCCATC GCGCATTTGA CGGTAAAACG TTACGTTCCG CTCGTGGGTA CGAAATACAT CAGTCAGCAG GAGTACGACC AGGCCATTGC TGATGCTCGC CAGGCCGATG CCGCCGTGAT TGCCGCAAAA GCCACAGTCG AAAGCGCTCG CATCAATCTC GCTTATACCA AAGTGACTGC GCCAATTAGC GGACGTATCG GCAAATCGAC CGTGACCGAA GGCGCTCTTG TCACTAATGG GCAAACGACT GAACTGGCGA CTGTCCAGCA GCTCGATCCT ATCTACGTTG ATGTGACCCA ATCCAGCAAC GATTTTATGA GGCTGAAGCA ATCCGTAGAG CAAGGAAATT TGCATAAGGA AAACGCCACC AGCAACGTAG AGTTGGTCAT GGAAAACGGT CAAACCTATC CCCTGAAAGG TACGCTGCAA TTCTCCGATG TTACCGTTGA TGAAAGCACC GGCTCCATAA CCCTACGTGC CGTCTTCCCT AACCCGCAAC ATACGCTTTT ACCTGGTATG TTTGTGCGCG CACGGATTGA TGAAGGCGTC CAATCTGATG CCATTCTTAT CCCGCAACAA GGCGTTAGCC GCACACCGCG TGGTGATGCA ACCGTGCTGA TTGTTAACGA TAAAAGTCAG GTTGAAGCGC GCCCTGTCGT TGCCAGCCAG GCGATTGGCG ATAAATGGTT GATTAGCGAA GGGCTGAAAT CTGGCGATCA AGTCATTGTC AGCGGCCTGC AAAAAGCGCG TCCGGGAGAG CAGGTTAAAG CCACTACCGA TACCCCCGCA GATTCTGCAT CGAAGTAA
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Protein sequence | MTKHARFFLL PSFILISAAL IAGCNDKGEE KAHVGEPQVT VHIVKTAPLE VKTELPGRTN AYRIAEVRPQ VSGIVLSRNF TEGSDVQAGQ SLYQIDPATY QASYDSAKGE LAKSEAAAAI AHLTVKRYVP LVGTKYISQQ EYDQAIADAR QADAAVIAAK ATVESARINL AYTKVTAPIS GRIGKSTVTE GALVTNGQTT ELATVQQLDP IYVDVTQSSN DFMRLKQSVE QGNLHKENAT SNVELVMENG QTYPLKGTLQ FSDVTVDEST GSITLRAVFP NPQHTLLPGM FVRARIDEGV QSDAILIPQQ GVSRTPRGDA TVLIVNDKSQ VEARPVVASQ AIGDKWLISE GLKSGDQVIV SGLQKARPGE QVKATTDTPA DSASK
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