Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_3551 |
Symbol | accC |
ID | 6144495 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | + |
Start bp | 3633317 |
End bp | 3634666 |
Gene Length | 1350 bp |
Protein Length | 449 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 641618380 |
Product | acetyl-CoA carboxylase biotin carboxylase subunit |
Protein accession | YP_001745527 |
Protein GI | 170683611 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0439] Biotin carboxylase |
TIGRFAM ID | [TIGR00514] acetyl-CoA carboxylase, biotin carboxylase subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0242255 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 55 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGGATA AAATTGTTAT TGCCAACCGC GGCGAGATTG CATTGCGTAT TCTTCGTGCC TGTAAAGAAC TGGGCATCAA GACTGTCGCT GTGCACTCCA GCGCGGATCG CGATCTAAAA CACGTATTAC TGGCAGATGA AACGGTCTGT ATCGGCCCTG CTCCGTCAGT AAAAAGTTAT CTGAACATCC CGGCAATCAT CAGCGCCGCT GAAATCACCG GCGCAGTAGC AATCCATCCG GGCTACGGCT TCCTCTCCGA GAACGCCAAC TTTGCCGAGC AGGTTGAGCG CTCCGGCTTT ATCTTCATCG GCCCGAAAGC AGAAACCATT CGCCTGATGG GCGACAAAGT ATCCGCAATC GCGGCGATGA AAAAAGCGGG CGTTCCTTGC GTACCGGGTT CTGACGGCCC GCTGGGCGAC GATATGGATA AAAACCGCGC CATTGCTAAA CGCATTGGTT ATCCGGTAAT TATCAAAGCC TCCGGCGGCG GCGGCGGTCG CGGTATGCGC GTAGTGCGCG GCGACGCTGA ACTGGCACAA TCCATCTCCA TGACCCGTGC GGAAGCGAAA GCTGCTTTCA GCAACGATAT GGTTTACATG GAGAAATACC TGGAAAATCC TCGCCACGTC GAGATTCAGG TACTGGCTGA CGGTCAGGGC AACGCTATCT ATCTGGCGGA ACGTGACTGC TCCATGCAGC GCCGCCACCA GAAAGTGGTC GAAGAAGCAC CAGCACCGGG CATTACCCCG GAACTGCGTC GCTACATCGG CGAACGTTGC GCTAAAGCAT GTGTTGATAT CGGCTATCGC GGTGCAGGTA CTTTCGAGTT CCTGTTCGAA AATGGCGAGT TCTATTTCAT CGAAATGAAC ACCCGTATTC AGGTAGAACA CCCGGTTACT GAAATGATCA CCGGCGTTGA CCTGATCAAA GAACAGCTGC GTATCGCTGC CGGTCAACCG CTGTCGATCA AGCAAGAAGA AGTTCACGTT CGCGGCCATG CGGTGGAATG TCGTATCAAC GCCGAAGATC CGAACACCTT CCTGCCAAGT CCGGGCAAAA TCACCCGTTT CCACGCACCT GGCGGTTTTG GCGTACGTTG GGAGTCTCAT ATCTACGCGG GCTACACCGT ACCGCCGTAC TATGACTCAA TGATCGGTAA GCTGATTTGC TACGGTGAAA ACCGTGACGT GGCGATTGCC CGCATGAAGA ATGCGCTGCA GGAGCTGATC ATCGACGGTA TCAAAACCAA CGTTGATCTG CAGATCCGCA TCATGAATGA CGAGAACTTC CAGCATGGTG GCACTAACAT CCACTATCTG GAGAAAAAAC TCGGTCTTCA GGAAAAATAA
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Protein sequence | MLDKIVIANR GEIALRILRA CKELGIKTVA VHSSADRDLK HVLLADETVC IGPAPSVKSY LNIPAIISAA EITGAVAIHP GYGFLSENAN FAEQVERSGF IFIGPKAETI RLMGDKVSAI AAMKKAGVPC VPGSDGPLGD DMDKNRAIAK RIGYPVIIKA SGGGGGRGMR VVRGDAELAQ SISMTRAEAK AAFSNDMVYM EKYLENPRHV EIQVLADGQG NAIYLAERDC SMQRRHQKVV EEAPAPGITP ELRRYIGERC AKACVDIGYR GAGTFEFLFE NGEFYFIEMN TRIQVEHPVT EMITGVDLIK EQLRIAAGQP LSIKQEEVHV RGHAVECRIN AEDPNTFLPS PGKITRFHAP GGFGVRWESH IYAGYTVPPY YDSMIGKLIC YGENRDVAIA RMKNALQELI IDGIKTNVDL QIRIMNDENF QHGGTNIHYL EKKLGLQEK
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