| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_3542 |
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| Symbol | cafA |
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| ID | 6147375 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | - |
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| Start bp | 3622971 |
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| End bp | 3624440 |
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| Gene Length | 1470 bp |
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| Protein Length | 489 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 641618371 |
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| Product | ribonuclease G |
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| Protein accession | YP_001745518 |
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| Protein GI | 170679965 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1530] Ribonucleases G and E |
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| TIGRFAM ID | [TIGR00757] ribonuclease, Rne/Rng family |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.721219 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 52 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGGCTG AATTGTTAGT AAACGTAACG CCTTCGGAAA CGCGAGTGGC GTATATTGAT
GGCGGTATTC TGCAGGAAAT TCATATTGAA CGTGAGGCGC GACGCGGAAT AGTAGGCAAT
ATCTACAAGG GTCGTGTAAG TCGTGTACTT CCGGGTATGC AGGCGGCTTT TGTAGATATT
GGGCTGGATA AAGCCGCGTT TCTTCATGCA TCCGACATCA TGCCGCACAC CGAATGTGTG
GCGGGTGAAG AACAAAAGCA ATTCACGGTG CGCGACATCT CGGAGCTGGT CCGTCAGGGG
CAAGATCTGA TGGTGCAGGT GGTGAAAGAT CCGCTTGGCA CTAAAGGTGC GCGCCTGACC
ACCGATATCA CGCTGCCTTC TCGCTATCTG GTGTTTATGC CAGGTGCTTC TCACGTTGGG
GTATCCCAAC GTATTGAAAG CGAATCAGAA CGTGAACGCC TGAAAAAAGT GGTCGCAGAG
TATTGTGACG AGCAGGGCGG GTTTATCATC CGTACTGCAG CGGAAGGGGT TGGCGAGGCT
GAACTGGCCT CCGATGCCGC TTATCTGAAA CGCGTCTGGA CCAAAGTTAT GGAGCGTAAA
AAGCGCCCAC AGACCCGTTA TCAGCTGTAC GGCGAACTGG CGCTGGCGCA GCGTGTTCTG
CGTGATTTCG CCGACGCCGA ACTCGACCGC ATTCGCGTTG ACTCACGCCT GACTTACGAA
GCATTGCTGG AGTTTACCTC GGAGTACATT CCCGAGATGA CCAGCAAGCT GGAGCATTAC
ACCGGACGCC AGCCGATTTT CGATCTCTTT GATGTCGAAA ACGAAATTCA GCGAGCGCTG
GAACGCAAAG TAGAACTGAA ATCCGGTGGC TATCTGATTA TCGACCAGAC CGAAGCGATG
ACCACCGTGG ACATCAATAC CGGGGCGTTT GTCGGTCATC GCAATCTGGA CGACACCATT
TTCAATACCA ATATTGAAGC GACGCAGGCT ATCGCTCGCC AGTTACGGTT GCGCAATCTG
GGCGGGATTA TCATTATTGA TTTCATCGAC ATGAATAATG AAGATCACCG TCGCCGCGTG
TTGCATTCGC TGGAGCAGGC GTTGAGCAAA GACCGGGTGA AAACCAGCGT TAATGGTTTT
TCGGCGCTGG GGCTGGTGGA GATGACGCGT AAACGCACCC GCGAAAGCAT TGAGCACGTA
CTGTGTAACG AATGCCCAAC CTGCCACGGT CGCGGAACGG TGAAAACCGT GGAAACGGTA
TGCTATGAAA TCATGCGCGA GATTGTTCGT GTCCACCATG CTTACGACTC CGACCGTTTC
CTGGTCTATG CTTCTCCGGC AGTAGCCGAA GCCTTGAAAG GCGAAGAGTC ACACTCGCTG
GCGGAAGTGG AAATTTTCGT TGGCAAACAG GTTAAAGTAC AAATTGAACC GCTCTATAAC
CAGGAGCAGT TTGACGTCGT AATGATGTAA
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| Protein sequence | MTAELLVNVT PSETRVAYID GGILQEIHIE REARRGIVGN IYKGRVSRVL PGMQAAFVDI
GLDKAAFLHA SDIMPHTECV AGEEQKQFTV RDISELVRQG QDLMVQVVKD PLGTKGARLT
TDITLPSRYL VFMPGASHVG VSQRIESESE RERLKKVVAE YCDEQGGFII RTAAEGVGEA
ELASDAAYLK RVWTKVMERK KRPQTRYQLY GELALAQRVL RDFADAELDR IRVDSRLTYE
ALLEFTSEYI PEMTSKLEHY TGRQPIFDLF DVENEIQRAL ERKVELKSGG YLIIDQTEAM
TTVDINTGAF VGHRNLDDTI FNTNIEATQA IARQLRLRNL GGIIIIDFID MNNEDHRRRV
LHSLEQALSK DRVKTSVNGF SALGLVEMTR KRTRESIEHV LCNECPTCHG RGTVKTVETV
CYEIMREIVR VHHAYDSDRF LVYASPAVAE ALKGEESHSL AEVEIFVGKQ VKVQIEPLYN
QEQFDVVMM
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