| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_3520 |
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| Symbol | nanA |
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| ID | 6142606 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | - |
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| Start bp | 3599608 |
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| End bp | 3600501 |
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| Gene Length | 894 bp |
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| Protein Length | 297 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 641618349 |
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| Product | N-acetylneuraminate lyase |
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| Protein accession | YP_001745496 |
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| Protein GI | 170680563 |
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| COG category | [E] Amino acid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0329] Dihydrodipicolinate synthase/N-acetylneuraminate lyase |
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| TIGRFAM ID | [TIGR00683] N-acetylneuraminate lyase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0303093 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 57 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCAACGA ATTTACGTGG CGTAATGGCC GCACTCCTGA CTCCTTTTGA TCAACAACAA
GCACTGGATA AAGCGAGTCT GCGTCGCCTG GTTCAGTTCA ATATTCAGCA GGGCATCGAC
GGTTTATACG TGGGTGGTTC TACCGGCGAA GCCTTTGTAC AAAGCCTTTC CGAGCGTGAA
CAGGTACTGG AAATCGTCGC CGAAGAGGCG AAAGGCAAGA TTAAACTCAT CGCTCACGTA
GGTTGCGTCA GCACCGCCGA AAGCCAACAA CTTGCGGCAT CGGCTAAACG TTATGGCTTC
GATGCCGTCT CCGCCGTCAC ACCGTTCTAC TATCCTTTCA GCTTTGAAGA ACACTGCGAT
CACTATCGGG CAATTATTGA TTCAGCGGAT GGTTTGCCGA TGGTGGTGTA CAACATTCCG
GCGTTAAGTG GCGTTAAACT GAGCCTGGAT CAGATCAACA CTCTGGTTAC GTTGCCAGGT
GTTGGCGCGC TGAAACAGAC CTCTGGCGAT CTCTATCAGA TGGAGCAGAT CCGTCGTGAA
CATCCGGATC TGGTGCTCTA TAACGGTTAC GACGAAATCT TCGCCTCTGG TCTTCTGGCG
GGCGCTGATG GTGGTATCGG TAGTACCTAC AACATCATGG GCTGGCGTTA TCAGGGCATT
GTTAAGGCGC TGAAAGAAGG CGATATCCAG ACCGCGCAGA AGCTGCAAAC CGAATGTAAT
AAAGTCATTG ATTTACTGAT CAAAACGGGC GTATTCCGCG GCCTGAAAAC GGTCCTCCAT
TATATGGATG TCGTTTCTGT GCCGCTGTGC CGCAAACCGT TTGGTCCGGT AGATGAAAAA
TATCTGCCAG AACTGAAGGC GCTGGCCCAG CAGTTGATGC AAGAGCGCGG GTGA
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| Protein sequence | MATNLRGVMA ALLTPFDQQQ ALDKASLRRL VQFNIQQGID GLYVGGSTGE AFVQSLSERE
QVLEIVAEEA KGKIKLIAHV GCVSTAESQQ LAASAKRYGF DAVSAVTPFY YPFSFEEHCD
HYRAIIDSAD GLPMVVYNIP ALSGVKLSLD QINTLVTLPG VGALKQTSGD LYQMEQIRRE
HPDLVLYNGY DEIFASGLLA GADGGIGSTY NIMGWRYQGI VKALKEGDIQ TAQKLQTECN
KVIDLLIKTG VFRGLKTVLH YMDVVSVPLC RKPFGPVDEK YLPELKALAQ QLMQERG
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