Gene EcSMS35_3507 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_3507 
Symbol 
ID6142725 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp3579734 
End bp3580663 
Gene Length930 bp 
Protein Length309 aa 
Translation table11 
GC content56% 
IMG OID641618336 
Productradical SAM family protein 
Protein accessionYP_001745483 
Protein GI170683121 
COG category[R] General function prediction only 
COG ID[COG1242] Predicted Fe-S oxidoreductase 
TIGRFAM ID[TIGR01212] radical SAM protein, TIGR01212 family 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones58 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGTTAC AGAAATTAGT CAATATGTTT GGTGGTGATC TCACCCGTCG TTATGGGCAA 
AAGGTGCATA AGCTGACGCT GCACGGCGGT TTTAGCTGCC CTAACCGTGA CGGTACCATC
GGGCGTGGTG GCTGCACATT CTGTAATGTG GCCTCGTTTG CCGATGAAGC GCAGCAGCAT
CGTTCCATTG CCGAGCAACT GGCGCACCAG GCGAATTTAG TTAACCGCGC TAAACGCTAT
CTGGCCTACT TTCAGGCGTA TACCAGCACC TTTGCGGAAG TTCAGGTGCT GCGTTCTATG
TATCAGCAGG CGGTGAGCCA GGCCAATATT GTCGGTTTGT GTGTTGGTAC CCGCCCGGAC
TGCGTGCCGG ATGCGGTGCT GGATCTGCTT TGCGAATATA AGGACCAGGG TTACGAAGTG
TGGCTGGAGC TGGGGCTACA AACCGCCCAC GACAAAACGC TGCATCGCAT CAATCGCGGT
CATGATTTTG CCTGTTATCA GCGCACGACG CAGCTGGCGC GTGAGCGTGG GCTGAAGGTG
TGTTCTCACT TAATTGTCGG CCTGCCTGGC GAAGGGCAGG CTGAATGTTT GCAAACGCTG
GAGCGAGTCG TTGAAACTGG CGTGGACGGC ATAAAGCTGC ATCCGCTGCA TATTGTGAAA
GGCAGCATTA TGGCGAAAGC CTGGGAAGCG GGGCGTTTGA ACGGTATTGA ACTGGAAGAT
TACACGCTCA CTGCCGGAGA AATGATTCGC CATACGCCAC CGGAAGTGAT CTACCACCGC
ATTTCCGCCA GCGCCCGTCG CCCGACGCTG CTTGCTCCTC TGTGGTGCGA AAATCGCTGG
ACGGGAATGG TCGAGCTGGA TCGTTATCTG AATGAACATG GCGTACAGGG ATCGGCGCTG
GGACGTCCGT GGCTACCTCC AACGGCGTAG
 
Protein sequence
MQLQKLVNMF GGDLTRRYGQ KVHKLTLHGG FSCPNRDGTI GRGGCTFCNV ASFADEAQQH 
RSIAEQLAHQ ANLVNRAKRY LAYFQAYTST FAEVQVLRSM YQQAVSQANI VGLCVGTRPD
CVPDAVLDLL CEYKDQGYEV WLELGLQTAH DKTLHRINRG HDFACYQRTT QLARERGLKV
CSHLIVGLPG EGQAECLQTL ERVVETGVDG IKLHPLHIVK GSIMAKAWEA GRLNGIELED
YTLTAGEMIR HTPPEVIYHR ISASARRPTL LAPLWCENRW TGMVELDRYL NEHGVQGSAL
GRPWLPPTA