| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_3497 |
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| Symbol | lptB |
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| ID | 6146701 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | + |
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| Start bp | 3570557 |
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| End bp | 3571282 |
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| Gene Length | 726 bp |
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| Protein Length | 241 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 641618326 |
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| Product | putative ABC transporter ATP-binding protein YhbG |
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| Protein accession | YP_001745473 |
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| Protein GI | 170680394 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1137] ABC-type (unclassified) transport system, ATPase component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 57 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCAACAT TAACTGCAAA GAACCTTGCA AAAGCCTATA AAGGCCGTCG CGTGGTAGAA
GACGTCAGCC TGACCGTCAA CTCCGGGGAA ATTGTCGGTC TGCTGGGGCC AAACGGTGCC
GGTAAGACCA CCACTTTCTA CATGGTTGTA GGCATTGTGC CGCGCGATGC GGGCAACATC
ATTATTGATG ATGACGATAT CAGTCTGCTG CCTCTGCATG CACGCGCGCG CCGCGGTATC
GGCTATCTGC CACAGGAAGC CTCCATTTTC CGTCGCCTCA GCGTTTACGA TAACCTGATG
GCGGTACTGC AAATTCGTGA CGACTTGTCT GCTGAACAAC GTGAAGACCG CGCGAACGAG
CTGATGGAAG AGTTTCACAT TGAGCACCTG CGTGACAGCA TGGGGCAGTC ACTCTCCGGG
GGTGAACGTC GCCGTGTAGA AATTGCCCGC GCACTGGCTG CGAATCCGAA ATTTATTCTG
CTCGACGAAC CGTTTGCCGG GGTTGACCCG ATCTCGGTTA TCGACATTAA ACGCATCATT
GAACACCTGC GCGACAGCGG CCTGGGCGTA CTGATCACTG ACCACAACGT GCGTGAAACA
CTGGCGGTTT GTGAACGCGC TTATATCGTC AGTCAGGGGC ATTTGATCGC CCACGGCACG
CCTACAGAAA TCTTACAAGA CGAACACGTT AAGCGTGTAT ACCTTGGGGA AGACTTCAGA
CTCTGA
|
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| Protein sequence | MATLTAKNLA KAYKGRRVVE DVSLTVNSGE IVGLLGPNGA GKTTTFYMVV GIVPRDAGNI
IIDDDDISLL PLHARARRGI GYLPQEASIF RRLSVYDNLM AVLQIRDDLS AEQREDRANE
LMEEFHIEHL RDSMGQSLSG GERRRVEIAR ALAANPKFIL LDEPFAGVDP ISVIDIKRII
EHLRDSGLGV LITDHNVRET LAVCERAYIV SQGHLIAHGT PTEILQDEHV KRVYLGEDFR
L
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