Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_3469 |
Symbol | yhbX |
ID | 6145555 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | - |
Start bp | 3546744 |
End bp | 3548261 |
Gene Length | 1518 bp |
Protein Length | 505 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 641618298 |
Product | inner membrane protein yhbX |
Protein accession | YP_001745446 |
Protein GI | 170680504 |
COG category | [R] General function prediction only |
COG ID | [COG2194] Predicted membrane-associated, metal-dependent hydrolase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0525732 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 49 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTTCAGC GATTGCTGTT CTTCGTCCTG ACCATCCTGG TTGTTAAACG TATATCATCC CTTCCGCTTC GCCTGCTTGT TGCCGCACCA TTTGTGTTAC TGACTGCGGC AGACATGAGT ATTAGCCTCT ATTCATGGTG TACCTTTGGT ACAACTTTCA ATGATGGATT TGCGATTAGT GTGCTGCAGA GTGATCCGGA TGAAGTTGTG AAAATGTTGG GGATGTATAT CCCTTATCTA TGTGCTTTTG CTTTTTTATC CCTTCTTTTT TTGGCAGTAA TAATAAAATA TGATGTTTCC TTGCCGACAA AAAAAGTGAC AGGAATATTA TTGCTGATTG TCATTTCGGG CAGTTTATTT TCAGCTTGTC AATTTGCTTA TAAAGATGCA AAAAATAAAA AAGCGTTCAG TCCATATATA CTAGCGTCTC GATTTGCTAC CTATACACCG TTTTTCAATC TCAATTATTT TGCTTTAGCA GCGAAAGAGC ATCAAAGATT ACTCTCAATT GCAAACACGG TGCCGTATTT TCAATTATCA GTCAGGGATA CAGGTATTGA TACCTACGTG TTGATTGTGG GGGAGTCTGT ACGTGTCGAC AATATGTCTT TGTATGGATA CACACGCTCT ACGACACCGC AAGTCGAAGC ACAAAGAAAA CAGATCAAAC TGTTTAATCA AGCAATAAGC GGTGCACCTT ACACTGCGCT GTCGGTTCCC CTTTCTTTAA CTGCTGATTC TGTTTTGAGT CATGACATTC ATAATTACCC GGACAACATT ATTAATATGG CTAATCAAGC AGGATTTCAG ACTTTCTGGC TAAGCTCGCA ATCCGCTTTT CGGCAGAATG GTACAGCAGT TACCAGTATC GCCATGCGCG CCATGGAAAC AGTCTATGTC AGAGGATTTG ATGAATTGTT GTTGCCGCAT TTATCGCAAG CGTTACAGCA AAAGACGCAG CAAAAGAAAC TGATTGTTCT TCATTTAAAT GGAAGCCATG AACCGGCTTG TAGCGCCTAT CCGCAATCCA GCGCCGTGTT TCAACCGCAG GACGATCAGG ATGCCTGCTA TGACAACTCC ATTCATTACA CAGATAGTTT GCTAGGTCAG GTTTTTGAAT TATTAAAAGA TCGCCGCGCC TCGGTCATGT ATTTTGCCGA CCACGGCCTG GAACGCGACC CTACGAAGAA GAACGTCTAT TTTCATGGAG GCAGGGAGGC CAGCCAGCAG GCATATCATG TCCCGATGTT TATCTGGTAT AGCCCCGTTC TTGGGGATGG CGTGGATCGC ACAACGGAAA ACGATATCTT TTCCACTGCG TACAATAATT ACCTTATTAA TGCGTGGATG GGGGTAACAA AGCCGGAACA GCCGCAAACG CTGGAGGAAG TGATTGCACA CTATAAAGGA GACTCACGGG TTGTAGATGC AAACCATGAT GTTTTCGATT TTGTGATGCT AAGAAAGGAG TTTACTGAGG ATAAGCAAGG TAACCCCACC CCTGAAGGGC AGGGTTGA
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Protein sequence | MVQRLLFFVL TILVVKRISS LPLRLLVAAP FVLLTAADMS ISLYSWCTFG TTFNDGFAIS VLQSDPDEVV KMLGMYIPYL CAFAFLSLLF LAVIIKYDVS LPTKKVTGIL LLIVISGSLF SACQFAYKDA KNKKAFSPYI LASRFATYTP FFNLNYFALA AKEHQRLLSI ANTVPYFQLS VRDTGIDTYV LIVGESVRVD NMSLYGYTRS TTPQVEAQRK QIKLFNQAIS GAPYTALSVP LSLTADSVLS HDIHNYPDNI INMANQAGFQ TFWLSSQSAF RQNGTAVTSI AMRAMETVYV RGFDELLLPH LSQALQQKTQ QKKLIVLHLN GSHEPACSAY PQSSAVFQPQ DDQDACYDNS IHYTDSLLGQ VFELLKDRRA SVMYFADHGL ERDPTKKNVY FHGGREASQQ AYHVPMFIWY SPVLGDGVDR TTENDIFSTA YNNYLINAWM GVTKPEQPQT LEEVIAHYKG DSRVVDANHD VFDFVMLRKE FTEDKQGNPT PEGQG
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