Gene EcSMS35_3466 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_3466 
Symbol 
ID6144741 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp3544310 
End bp3544774 
Gene Length465 bp 
Protein Length154 aa 
Translation table11 
GC content50% 
IMG OID641618295 
Producthypothetical protein 
Protein accessionYP_001745444 
Protein GI170680823 
COG category[S] Function unknown 
COG ID[COG0779] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.155297 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones49 
Fosmid unclonability p-value0.925377 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGGGGTGG GCTTGTCCAC ATTAGAGCAA AAATTAACAG AGATGATTAC TGCGCCAGTT 
GAGGCCCTGG GTTTTGAACT GGTTGGCATC GAATTTATTC GCGGTCGCAC ATCCACACTG
CGCATCTATA TTGATAGTGA AGATGGCATC AATGTTGATG ATTGTGCTGA TGTGAGCCAC
CAGGTAAGTG CTGTGCTGGA TGTTGAAGAT CCCATCACCG TTGCTTATAA CCTGGAAGTC
TCCTCACCGG GTCTCGATCG CCCACTGTTC ACGGCTGAAC ACTACGCCCG TTTCGTCGGA
GAAGAGGTGA CTCTGGTTCT CCGCATGGCG GTACAAAACC GTCGTAAATG GCAGGGCGTT
ATCAAAGCGG TAGACGGTGA AATGATCACA GTTACCGTCG AAGGTAAAGA TGAAGTGTTC
GCGCTGAGTA ATATCCAGAA GGCGAACCTG GTTCCCCACT TTTAA
 
Protein sequence
MGVGLSTLEQ KLTEMITAPV EALGFELVGI EFIRGRTSTL RIYIDSEDGI NVDDCADVSH 
QVSAVLDVED PITVAYNLEV SSPGLDRPLF TAEHYARFVG EEVTLVLRMA VQNRRKWQGV
IKAVDGEMIT VTVEGKDEVF ALSNIQKANL VPHF