| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_3462 |
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| Symbol | truB |
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| ID | 6146044 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | - |
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| Start bp | 3538589 |
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| End bp | 3539533 |
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| Gene Length | 945 bp |
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| Protein Length | 314 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 641618291 |
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| Product | tRNA pseudouridine synthase B |
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| Protein accession | YP_001745440 |
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| Protein GI | 170680914 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0130] Pseudouridine synthase |
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| TIGRFAM ID | [TIGR00431] tRNA pseudouridine 55 synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 0.266438 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTCGTC CTCGTCGTCG CGGTCGCGAC ATTAACGGCG TTTTGTTGCT GGATAAACCG
CAGGGGATGT CCAGCAACGA TGCGCTGCAA AAAGTGAAAC GGATTTATAA CGCCAACCGT
GCCGGGCATA CCGGTGCGCT GGACCCGCTG GCGACCGGCA TGTTGCCGAT TTGCCTCGGG
GAAGCGACGA AGTTTTCCCA GTATCTGCTG GACTCCGACA AACGCTATCG GGTCATTGCG
CGTCTTGGAC AGCGTACCGA TACGTCTGAT GCCGACGGAC AAATCGTTGA AGAACGTCCG
GTAACCTTTA GTGCAGAGCA ACTGGCGGCG GCACTGGATA CTTTCCGTGG CGATATCGAA
CAGATCCCTT CGATGTATTC AGCACTGAAA TACCAGGGCA AAAAACTGTA CGAATATGCG
CGTCAGGGCA TTGAAGTTCC GCGTGAAGCG CGCCCGATTA CCGTTTATGA ATTGCTGTTT
ATTCGCCACG AAGGCAATGA GCTGGAGCTG GAAATTCACT GCTCAAAAGG CACTTATATC
CGCACCATCA TTGATGACCT GGGTGAAAAA CTCGGTTGTG GCGCGCATGT TATTTACCTG
CGTCGTCTGG CGGTAAGTAA ATATCCGGTT GAACGGATGG TGACCCTGGA ACATCTGCGT
GAACTGGTTG AACAAGCCGA ACAGCAGGAT ATTCCAGCCG CGGAGTTACT TGATCCATTA
CTGATGCCAA TGGACAGTCC AGCTTCGGAC TACCCGGTGG TGAATCTTCC GTTAACGTCT
TCTGTTTACT TCAAAAATGG TAACCCGGTT CGTACATCCG GTGCGCCGCT GGAAGGACTG
GTTCGCGTTA CAGAAGGTGA GAACGGCAAG TTTATCGGTA TGGGCGAAAT TGACGATGAA
GGCCGCGTCG CGCCTCGTCG CCTGGTGGTT GAATACCCGG CGTAA
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| Protein sequence | MSRPRRRGRD INGVLLLDKP QGMSSNDALQ KVKRIYNANR AGHTGALDPL ATGMLPICLG
EATKFSQYLL DSDKRYRVIA RLGQRTDTSD ADGQIVEERP VTFSAEQLAA ALDTFRGDIE
QIPSMYSALK YQGKKLYEYA RQGIEVPREA RPITVYELLF IRHEGNELEL EIHCSKGTYI
RTIIDDLGEK LGCGAHVIYL RRLAVSKYPV ERMVTLEHLR ELVEQAEQQD IPAAELLDPL
LMPMDSPASD YPVVNLPLTS SVYFKNGNPV RTSGAPLEGL VRVTEGENGK FIGMGEIDDE
GRVAPRRLVV EYPA
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