Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_3411 |
Symbol | tdcD |
ID | 6145680 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | - |
Start bp | 3492680 |
End bp | 3493888 |
Gene Length | 1209 bp |
Protein Length | 402 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 641618240 |
Product | propionate/acetate kinase |
Protein accession | YP_001745389 |
Protein GI | 170680069 |
COG category | [C] Energy production and conversion |
COG ID | [COG0282] Acetate kinase |
TIGRFAM ID | [TIGR00016] acetate kinase |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 59 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATGAAT TTCCGGTTGT TTTGGTTATT AACTGTGGTT CGTCTTCGAT TAAGTTTTCC GTACTCGATG CCAGCGACTG TGAAGTATTA ATGTCAGGTA TTGCCGACGG TATTAACTCG GAAAATGCAT TCTTATCCGT AAATGGGGGA GAGCCAGCAC CGCTGGCTCA CCACAGCTAC GAAGGTGCAT TGAAGGCAAT TGCATTTGAA CTGGAAAAAC GGAATTTAAA TGACAGTGTG GCCTTAATTG GCCACCGCAT CGCTCACGGC GGCAGTATTT TTACCGAGTC CGCCATTATT ACCGATGAAG TCATTGATAA TATCCGTCGC GTTTCTCCAC TGGCACCCCT GCATAATTAC GCCAATTTAA GCGGTATTGA ATCGGCGCAG CAATTATTTC CGGGCGTAAC TCAGGTGGCG GTATTTGATA CCAGTTTCCA CCAGACGATG GCTCCGGAAG CTTATTTATA CGGCCTGCCG TGGAAATATT ATGAAGAGTT AGGTGTACGC CGTTATGGTT TCCACGGCAC GTCGCACCGC TATGTTTCCC AGCGCGCACA TTCTTTGCTG AATCTGGCGG AAGATGACTC CGGCCTGGTT GTGGCGCATC TTGGCAATGG CGCGTCAATC TGTGCAGTTC GCAACGGTCA GAGTGTTGAT ACCTCAATGG GAATGACGCC GCTGGAAGGC TTGATGATGG GTACCCGCAG TGGCGATGTC GACTTTGGTG CGATGTCCTG GGTCGCCAGC CAAACCAACC AGAGCCTGGG TGACCTGGAA CGCGTAGTGA ATAAAGAGTC GGGATTATTA GGTATTTCCG GTCTTTCTTC GGATTTACGT GTTCTGGAAA AAGCCTGGCA TGAAGGTCAC GAACGCGCGC AACTGGCAAT TAAAACCTTT GTTCACCGAA TTGCCCGTCA TATTGCCGGA CACGCAGCCT CATTACATCG CCTGGATGGA ATTATATTCA CCGGCGGAAT AGGAGAGAAT TCAAGTTTAA TTCGTCGTCT GGTCATGGAA CATTTGGCTG TATTAGGCGT AGAGATTGAT ACAGAAATGA ATAATCGCTC TAACTCCTGT GGAGAGCGAA TTGTTTCCAG TGAAAATGCG CGTGTCATTT GCGCCGTTAT CCCAACCAAC GAAGAAAAAA TGATTGCTTT GGATGCCATT CATTTAGGCA AAGTGAACGC GCCCGCAGAA TTTGCATAA
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Protein sequence | MNEFPVVLVI NCGSSSIKFS VLDASDCEVL MSGIADGINS ENAFLSVNGG EPAPLAHHSY EGALKAIAFE LEKRNLNDSV ALIGHRIAHG GSIFTESAII TDEVIDNIRR VSPLAPLHNY ANLSGIESAQ QLFPGVTQVA VFDTSFHQTM APEAYLYGLP WKYYEELGVR RYGFHGTSHR YVSQRAHSLL NLAEDDSGLV VAHLGNGASI CAVRNGQSVD TSMGMTPLEG LMMGTRSGDV DFGAMSWVAS QTNQSLGDLE RVVNKESGLL GISGLSSDLR VLEKAWHEGH ERAQLAIKTF VHRIARHIAG HAASLHRLDG IIFTGGIGEN SSLIRRLVME HLAVLGVEID TEMNNRSNSC GERIVSSENA RVICAVIPTN EEKMIALDAI HLGKVNAPAE FA
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