Gene EcSMS35_3399 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_3399 
Symbol 
ID6144664 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp3480534 
End bp3481016 
Gene Length483 bp 
Protein Length160 aa 
Translation table11 
GC content49% 
IMG OID641618228 
Productputative inner membrane protein YqjF 
Protein accessionYP_001745377 
Protein GI170682888 
COG category[S] Function unknown 
COG ID[COG2259] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones56 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTCTCT CCATCGACAG CAACGACGCT AATAGCGCGC CCTTGCACAA AAAAACAATC 
AGCAGCCTGA GCGGCGCAGT GGAGAGTATG ATGAAAAAAT TAGAAGATGT TGGTGTACTG
GTAGCGCGTA TTTTAATGCC GATTCTGTTT ATTACCGCAG GCTGGGGAAA AATTACTGGC
TACGCGGGTA CCCAACAATA TATGGAAGCA ATGGGCGTCC CCGGCTTTAT GCTGCCGCTG
GTGATTCTGC TTGAGTTTGG TGGTGGTCTG GCAATCCTGT TCGGTTTCCT GACACGTACC
ACAGCCCTGT TTACTGCGGG CTTTACGCTG CTGACGGCAT TTTTATTTCA CAGCAACTTT
GCTGAAGGCG TCAACTCGCT GATGTTCATG AAAAACCTGA CGATTTCTGG CGGATTCCTG
CTGCTGGCAA TTACCGGTCC AGGCGCGTAT AGCATCGACC GCCTGCTGAA TAAAAAGTGG
TAA
 
Protein sequence
MILSIDSNDA NSAPLHKKTI SSLSGAVESM MKKLEDVGVL VARILMPILF ITAGWGKITG 
YAGTQQYMEA MGVPGFMLPL VILLEFGGGL AILFGFLTRT TALFTAGFTL LTAFLFHSNF
AEGVNSLMFM KNLTISGGFL LLAITGPGAY SIDRLLNKKW