Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_3399 |
Symbol | |
ID | 6144664 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | + |
Start bp | 3480534 |
End bp | 3481016 |
Gene Length | 483 bp |
Protein Length | 160 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 641618228 |
Product | putative inner membrane protein YqjF |
Protein accession | YP_001745377 |
Protein GI | 170682888 |
COG category | [S] Function unknown |
COG ID | [COG2259] Predicted membrane protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 56 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATTCTCT CCATCGACAG CAACGACGCT AATAGCGCGC CCTTGCACAA AAAAACAATC AGCAGCCTGA GCGGCGCAGT GGAGAGTATG ATGAAAAAAT TAGAAGATGT TGGTGTACTG GTAGCGCGTA TTTTAATGCC GATTCTGTTT ATTACCGCAG GCTGGGGAAA AATTACTGGC TACGCGGGTA CCCAACAATA TATGGAAGCA ATGGGCGTCC CCGGCTTTAT GCTGCCGCTG GTGATTCTGC TTGAGTTTGG TGGTGGTCTG GCAATCCTGT TCGGTTTCCT GACACGTACC ACAGCCCTGT TTACTGCGGG CTTTACGCTG CTGACGGCAT TTTTATTTCA CAGCAACTTT GCTGAAGGCG TCAACTCGCT GATGTTCATG AAAAACCTGA CGATTTCTGG CGGATTCCTG CTGCTGGCAA TTACCGGTCC AGGCGCGTAT AGCATCGACC GCCTGCTGAA TAAAAAGTGG TAA
|
Protein sequence | MILSIDSNDA NSAPLHKKTI SSLSGAVESM MKKLEDVGVL VARILMPILF ITAGWGKITG YAGTQQYMEA MGVPGFMLPL VILLEFGGGL AILFGFLTRT TALFTAGFTL LTAFLFHSNF AEGVNSLMFM KNLTISGGFL LLAITGPGAY SIDRLLNKKW
|
| |