| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_3385 |
|---|
| Symbol | exuT |
|---|
| ID | 6142629 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli SMS-3-5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010498 |
|---|
| Strand | + |
|---|
| Start bp | 3469938 |
|---|
| End bp | 3471236 |
|---|
| Gene Length | 1299 bp |
|---|
| Protein Length | 432 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 641618214 |
|---|
| Product | hexuronate transporter |
|---|
| Protein accession | YP_001745363 |
|---|
| Protein GI | 170683899 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2271] Sugar phosphate permease |
|---|
| TIGRFAM ID | [TIGR00893] d-galactonate transporter |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 63 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGTAAAA TTAAAGGGTT ACGTTGGTAT ATGATCGCAC TGGTGACGCT CGGCACCGTG
CTTGGTTACC TGACGCGTAA CACTGTGGCG GCAGCTGCGC CAACTCTGAT GGAAGAGTTA
AACATCTCCA CCCAACAGTA TTCCTATATC ATCGCAGCGT ATTCTGCTGC TTATACGGTC
ATGCAACCGG TAGCGGGTTA TGTACTGGAT GTGCTGGGTA CGAAAATCGG TTATGCAATG
TTTGCTGTAC TGTGGGCCGT GTTCTGTGGT GCAACCGCGC TGGCAGGTAG TTGGGGTGGC
CTGGCGGTTG CTCGTGGTGC GGTCGGTGCC GCGGAAGCCG CGATGATTCC GGCGGGTCTG
AAAGCCAGCT CCGAATGGTT CCCGGCGAAA GAGCGTTCCA TCGCGGTAGG TTACTTTAAC
GTAGGTTCTT CGATTGGTGC GATGATTGCG CCGCCGCTGG TGGTATGGGC AATCGTGATG
CACAGCTGGC AGATGGCATT TATCATCTCC GGTGCGTTGA GCTTTATCTG GGCGATGGCA
TGGCTGATTT TCTACAAGCA TCCGCGCGAC CAGAAACATC TGACCGATGA AGAACGCGAC
TACATTATTA ATGGTCAGGA AGCCCAGCAC CAGGTTGACA CAGCGAAGAA AATGTCCGTT
GGTCAGATCC TGCGCAACCG TCAGTTCTGG GGTATCGCGC TGCCGCGCTT CCTGGCAGAA
CCGGCATGGG GTACTTTTAA CGCGTGGATC CCGCTGTTCA TGTTTAAAGT TTACGGCTTT
AACCTGAAAG AGATCGCGAT GTTTGCCTGG ATGCCGATGC TGTTTGCTGA CCTCGGTTGT
ATCCTCGGTG GTTACCTGCC GCCGCTGTTC CAGCGTTGGT TTGGTGTGAA CCTGATCGTT
TCCCGTAAGA TGGTCGTAAC GCTGGGTGCT GTGCTGATGA TTGGCCCGGG TATGATCGGT
CTGTTCACCA ACCCGTATGT CGCGATTATG CTGCTGTGTA TCGGTGGTTT TGCTCACCAG
GCACTGTCTG GCGCACTGAT TACGCTCTCT TCTGACGTGT TCGGTCGTAA CGAAGTGGCG
ACGGCGAACG GTTTAACCGG GATGTCCGCA TGGCTGGCAA GTACGCTCTT TGCTCTGGTG
GTTGGTGCAC TGGCTGACAC CATCGGCTTT AGCCCGCTGT TCGCAGTACT TGCGGTATTC
GACCTACTGG GGGCACTGGT TATCTGGACG GTATTGCAGA ACAAACCGGC GATTGAGGTG
GCGCAGGAAT CACATAACGA TCCCGCACCG CAACATTAA
|
|---|
| Protein sequence | MRKIKGLRWY MIALVTLGTV LGYLTRNTVA AAAPTLMEEL NISTQQYSYI IAAYSAAYTV
MQPVAGYVLD VLGTKIGYAM FAVLWAVFCG ATALAGSWGG LAVARGAVGA AEAAMIPAGL
KASSEWFPAK ERSIAVGYFN VGSSIGAMIA PPLVVWAIVM HSWQMAFIIS GALSFIWAMA
WLIFYKHPRD QKHLTDEERD YIINGQEAQH QVDTAKKMSV GQILRNRQFW GIALPRFLAE
PAWGTFNAWI PLFMFKVYGF NLKEIAMFAW MPMLFADLGC ILGGYLPPLF QRWFGVNLIV
SRKMVVTLGA VLMIGPGMIG LFTNPYVAIM LLCIGGFAHQ ALSGALITLS SDVFGRNEVA
TANGLTGMSA WLASTLFALV VGALADTIGF SPLFAVLAVF DLLGALVIWT VLQNKPAIEV
AQESHNDPAP QH
|
|---|
| |