Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_3372 |
Symbol | |
ID | 6143075 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | + |
Start bp | 3452225 |
End bp | 3453658 |
Gene Length | 1434 bp |
Protein Length | 477 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 641618201 |
Product | amino acid permease family protein |
Protein accession | YP_001745350 |
Protein GI | 170679908 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0531] Amino acid transporters |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 59 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTGATA CCAAACGTAA TACAATCGGC AAATTCGGCT TGCTCTCGCT GACTTTTGCC GCCGTTTACA GCTTTAACAA CGTTATCAAT AATAATATTG AGCTTGGACT GGCCTCGGCA CCGATGTTTT TCCTCGCGAC GATTTTTTAT TTTATTCCCT TCTGTCTGAT CATTGCAGAA TTTGTTTCGT TAAATAAAAA CTCAGAAGCC GGTGTCTACG CGTGGGTAAA AAGTTCGCTG GGCGGACGTT GGGCATTTAT TACTGCCTAT ACCTACTGGT TCGTAAACCT GTTCTTTTTC ACCTCGCTGT TACCGCGCGT TATTGCTTAT GCTTCGTATG CCTTCCTCGG CTACGAATAT ATTATGACGC CGGTTGCCAC CACCATTATC AGTATGGTGC TGTTCGCCTT CTCCACATGG GTTTCCACCA ACGGGGCGAA AATGCTGGGG CCAATCACCT CCGTCACTTC AACGCTGATG CTGCTGTTAA CGCTCTCCTA CATTTTACTG GCAGGTACGG CACTGGTTGG CGGCGTACAG CCTGCCGATC CGATCACCGT TGACGCGATG ATCCCGAACT TCAACTGGGC GTTCCTCGGC GTGACCACCT GGATCTTTAT GGCCGCAGGT GGCGCGGAGT CCGTCGCGGT GTACGTTAAC GACGTCAAAG GCGGTTCGAA ATCGTTCGTT AAAGTGATCA TCCTCGCCGG GATTTTTATC GGCGTACTGT ATTCCGTCTC CTCGGTGCTG ATTAACGTCT TCGTCAGCAG CAAAGAGTTG AAATTTACTG GCGGATCGGT ACAGGTATTC CACGGCATGG CGGCGTATTT TGGTCTACCG GAAGCACTGA TGAATCGCTT TGTCGGTCTG GTGTCCTTTA CCGCGATGTT CGGTTCCCTG CTGATGTGGA CGGCAACGCC GGTGAAAATT TTCTTCTCCG AAATTCCGGA AGGCATCTTT GGTAAGAAAA CCGTCGAACT GAACGAAAAC GGCGTTCCGG CGCGCGCAGC GTGGATCCAG TTCCTGATCG TCATCCCGCT GATGATTATC CCGATGCTCG GTTCCAATAC CGTGCAGGAT CTGATGAATA CCATTATTAA TATGACCGCC GCAGCGTCCA TGCTTCCGCC GTTATTCATC ATGCTGGCTT ACCTGAATTT ACGCGCCAAA TTAGATCACC TGCCACGCGA TTTCCGTATG GGTTCCCGAC GCACCGGTAT TATCGTTGTT TCAATGCTGA TTGCGATATT TGCTGTAGGG TTTGTCGCTT CGACATTCCC GACTGGCGCG AATATTCTGA CCATCATTTT TTATAACGTC GGCGGTATTG TTATCTTCCT CCGCTTTGCG TGGTGGAAAT ACAGTAAATA TATAAAGGGA TTAACGGCTG AAGAGCGCCA TATTGAAGCG ACGCCAGCCA GCAATGTTGA TTAA
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Protein sequence | MSDTKRNTIG KFGLLSLTFA AVYSFNNVIN NNIELGLASA PMFFLATIFY FIPFCLIIAE FVSLNKNSEA GVYAWVKSSL GGRWAFITAY TYWFVNLFFF TSLLPRVIAY ASYAFLGYEY IMTPVATTII SMVLFAFSTW VSTNGAKMLG PITSVTSTLM LLLTLSYILL AGTALVGGVQ PADPITVDAM IPNFNWAFLG VTTWIFMAAG GAESVAVYVN DVKGGSKSFV KVIILAGIFI GVLYSVSSVL INVFVSSKEL KFTGGSVQVF HGMAAYFGLP EALMNRFVGL VSFTAMFGSL LMWTATPVKI FFSEIPEGIF GKKTVELNEN GVPARAAWIQ FLIVIPLMII PMLGSNTVQD LMNTIINMTA AASMLPPLFI MLAYLNLRAK LDHLPRDFRM GSRRTGIIVV SMLIAIFAVG FVASTFPTGA NILTIIFYNV GGIVIFLRFA WWKYSKYIKG LTAEERHIEA TPASNVD
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