Gene EcSMS35_3369 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_3369 
SymbolebgR 
ID6146144 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp3447457 
End bp3448440 
Gene Length984 bp 
Protein Length327 aa 
Translation table11 
GC content51% 
IMG OID641618198 
ProductDNA-binding transcriptional repressor EbgR 
Protein accessionYP_001745347 
Protein GI170682761 
COG category[K] Transcription 
COG ID[COG1609] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones60 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAACAC TAAAAGACAT CGCAATCGAA GCTGGCGTAT CCCTGGCGAC AGTATCCAGG 
GTCTTAAATG ACGATCCGAC ATTGAATGTG AAAGAAGAGA CGAAACATCG CATTCTCGAG
ATCGCCGAAA AGCTGGAGTA CAAGACCAGT AGTGCCCGTA AACTCCAGAC AGGTGCAGTC
AACCAACACC ATATTCTGGC TATCTACAGC TACCAACAGG AGCTGGAGAT CAACGATCCT
TACTATCTGG CGATCCGCCA CGGCATTGAA ACCCAGTGCG AAAAACTGGC GATCGAACTG
ACCAACTGTT ATGAACACAG CGGCTTACCA GACATTAAAA ACGTCACCGG TATTTTAATT
GTCGGCAAAC CCACGCCCGC CCTGCGCGCC GCCGCTTGTG CGTTGACCGA CAATATCTGC
TTTATCGACT TTCACGAACC CGGCAGCGGT TACGATGCGG TGGATATCGA TCTGGCACGT
ATCAGTAAAG AAATCATCGA TTTCTATATC AATCAGGGCG TTAATCGTAT TGGTTTTATT
GGCGGTGAAG ACTTGCCTGG CAAGGCGGAT ATTCGTGAGG TCGCCTTTGT GGAATATGGT
CGTCTGAAAC ACGTGGTACG CGAAGAGGAT ATCTGGCGCG GCGGTTTTTC CAGTTCGTCG
GGCTATGAAC TGGCAAAACA GATGCTGGCG CAGGAAGACT ACCCGAAGGC GTTGTTTGTC
GCTTCTGATT CCATTGCTAT CGGCGTACTG CGGGCAATTC ATGAACGAGG CCTGAACATC
CCACAGGATA TTTCGCTTAT CAGCGTGAAC GACATCCCCA CCGCGCGATT TACCTTTCCG
CCGCTCTCAA CCGTGCGCAT CCATTCCGAG ATGATGGGAA GTCAGGGCGT TAACCTGTTG
TATGAAAAGG CTCGCGATGG TCGCGCGCTG CCGCTGTTAG TCTTCGTTCC CAGCAAATTA
AAACTCCGCG GCACGACCCG CTAA
 
Protein sequence
MATLKDIAIE AGVSLATVSR VLNDDPTLNV KEETKHRILE IAEKLEYKTS SARKLQTGAV 
NQHHILAIYS YQQELEINDP YYLAIRHGIE TQCEKLAIEL TNCYEHSGLP DIKNVTGILI
VGKPTPALRA AACALTDNIC FIDFHEPGSG YDAVDIDLAR ISKEIIDFYI NQGVNRIGFI
GGEDLPGKAD IREVAFVEYG RLKHVVREED IWRGGFSSSS GYELAKQMLA QEDYPKALFV
ASDSIAIGVL RAIHERGLNI PQDISLISVN DIPTARFTFP PLSTVRIHSE MMGSQGVNLL
YEKARDGRAL PLLVFVPSKL KLRGTTR