Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_3369 |
Symbol | ebgR |
ID | 6146144 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | + |
Start bp | 3447457 |
End bp | 3448440 |
Gene Length | 984 bp |
Protein Length | 327 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 641618198 |
Product | DNA-binding transcriptional repressor EbgR |
Protein accession | YP_001745347 |
Protein GI | 170682761 |
COG category | [K] Transcription |
COG ID | [COG1609] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 60 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAACAC TAAAAGACAT CGCAATCGAA GCTGGCGTAT CCCTGGCGAC AGTATCCAGG GTCTTAAATG ACGATCCGAC ATTGAATGTG AAAGAAGAGA CGAAACATCG CATTCTCGAG ATCGCCGAAA AGCTGGAGTA CAAGACCAGT AGTGCCCGTA AACTCCAGAC AGGTGCAGTC AACCAACACC ATATTCTGGC TATCTACAGC TACCAACAGG AGCTGGAGAT CAACGATCCT TACTATCTGG CGATCCGCCA CGGCATTGAA ACCCAGTGCG AAAAACTGGC GATCGAACTG ACCAACTGTT ATGAACACAG CGGCTTACCA GACATTAAAA ACGTCACCGG TATTTTAATT GTCGGCAAAC CCACGCCCGC CCTGCGCGCC GCCGCTTGTG CGTTGACCGA CAATATCTGC TTTATCGACT TTCACGAACC CGGCAGCGGT TACGATGCGG TGGATATCGA TCTGGCACGT ATCAGTAAAG AAATCATCGA TTTCTATATC AATCAGGGCG TTAATCGTAT TGGTTTTATT GGCGGTGAAG ACTTGCCTGG CAAGGCGGAT ATTCGTGAGG TCGCCTTTGT GGAATATGGT CGTCTGAAAC ACGTGGTACG CGAAGAGGAT ATCTGGCGCG GCGGTTTTTC CAGTTCGTCG GGCTATGAAC TGGCAAAACA GATGCTGGCG CAGGAAGACT ACCCGAAGGC GTTGTTTGTC GCTTCTGATT CCATTGCTAT CGGCGTACTG CGGGCAATTC ATGAACGAGG CCTGAACATC CCACAGGATA TTTCGCTTAT CAGCGTGAAC GACATCCCCA CCGCGCGATT TACCTTTCCG CCGCTCTCAA CCGTGCGCAT CCATTCCGAG ATGATGGGAA GTCAGGGCGT TAACCTGTTG TATGAAAAGG CTCGCGATGG TCGCGCGCTG CCGCTGTTAG TCTTCGTTCC CAGCAAATTA AAACTCCGCG GCACGACCCG CTAA
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Protein sequence | MATLKDIAIE AGVSLATVSR VLNDDPTLNV KEETKHRILE IAEKLEYKTS SARKLQTGAV NQHHILAIYS YQQELEINDP YYLAIRHGIE TQCEKLAIEL TNCYEHSGLP DIKNVTGILI VGKPTPALRA AACALTDNIC FIDFHEPGSG YDAVDIDLAR ISKEIIDFYI NQGVNRIGFI GGEDLPGKAD IREVAFVEYG RLKHVVREED IWRGGFSSSS GYELAKQMLA QEDYPKALFV ASDSIAIGVL RAIHERGLNI PQDISLISVN DIPTARFTFP PLSTVRIHSE MMGSQGVNLL YEKARDGRAL PLLVFVPSKL KLRGTTR
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