Gene EcSMS35_3334 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_3334 
Symbol 
ID6144198 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp3412402 
End bp3413070 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content45% 
IMG OID641618163 
ProductDsbA family thioredoxin 
Protein accessionYP_001745313 
Protein GI170681695 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones57 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGAAAT TAGGGATCTC ATCACTATTT AAAAGCATAC TGCTTACCGC AGCTTTGGCT 
GTTTCATTTA CCGCTTCTGC ATTTACCGAA GGCACGGATT ACATGGTTCT GGAAAAACCT
ATTCCGAATG CAGACAAAAC GCTGATTAAG GTATTCAGCT ACGCCTGCCC GTTCTGTTAC
AAGTACGACA AAGCGGTTAC CGGTCCGGTA TCGGAAAAAG TGAAAGATAT CGTTGCTTTC
ACGCCGTTCC ATCTGGAAAC CAAAGGTGAA TACGGCAAAC AAGCAAGCGA AGTCTTTGCG
GTCTTGATCA ATAAAGATAA AGCAGCAGGC ATTTCCTTAT TTGATGCTAA CTCTCAGTTT
AAGAAAGCCA AGTTTGCCTA CTACGTGGCT TATCACGACA AAAAAGAACG CTGGTCTGAC
GGTAAAGATC CGGCTGCTTT TATCAAAACC GGTCTGGATG CCGCAGGTAT GAGTCAGGCG
GATTTTGAAG CGGCACTGAA AGAACCAGCG GTTCAAGAAA CACTGGAAAA ATGGAAAGCC
TCTTATGATG TCGCCAAAAT CCAGGGGGTT CCAGCCTATG TCGTTAATGG TAAGTACTTG
ATCTACACCA AGAGCATCAA ATCCATCGAC GCGATGGCAG ACCTTATCCG TGAGTTAGCA
AGCAAATAA
 
Protein sequence
MSKLGISSLF KSILLTAALA VSFTASAFTE GTDYMVLEKP IPNADKTLIK VFSYACPFCY 
KYDKAVTGPV SEKVKDIVAF TPFHLETKGE YGKQASEVFA VLINKDKAAG ISLFDANSQF
KKAKFAYYVA YHDKKERWSD GKDPAAFIKT GLDAAGMSQA DFEAALKEPA VQETLEKWKA
SYDVAKIQGV PAYVVNGKYL IYTKSIKSID AMADLIRELA SK