| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_3290 |
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| Symbol | exbD |
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| ID | 6142922 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | - |
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| Start bp | 3365912 |
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| End bp | 3366337 |
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| Gene Length | 426 bp |
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| Protein Length | 141 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 641618120 |
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| Product | biopolymer transport protein ExbD |
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| Protein accession | YP_001745270 |
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| Protein GI | 170681759 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0848] Biopolymer transport protein |
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| TIGRFAM ID | [TIGR02803] TonB system transport protein ExbD, group 1 |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 52 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCAATGC ATCTTAACGA AAACCTCGAC GATAACGGCG AAATGCATGA TATCAACGTG
ACGCCGTTTA TCGACGTGAT GTTGGTTCTG CTGATTATCT TTATGGTGGC GGCACCGTTA
GCGACGGTAG ATGTGAAGGT GAACTTGCCT GCTTCTACCA GCACGCCGCA GCCGCGCCCG
GAAAAACCGG TTTATCTGTC GGTGAAGGCA GACAACTCGA TGTTTATCGG TAACGATCCG
GTCACCGATG AAACAATGAT TACGGCGTTG AATGCGTTAA CCGAAGGCAA GAAAGACACC
ACCATCTTCT TCCGAGCGGA CAAAACCGTC GATTACGAGA CGTTGATGAA GGTAATGGAT
ACGCTGCATC AGGCGGGTTA CCTGAAGATA GGTCTGGTTG GCGAAGAAAC TGCCAAAGCG
AAATAA
|
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| Protein sequence | MAMHLNENLD DNGEMHDINV TPFIDVMLVL LIIFMVAAPL ATVDVKVNLP ASTSTPQPRP
EKPVYLSVKA DNSMFIGNDP VTDETMITAL NALTEGKKDT TIFFRADKTV DYETLMKVMD
TLHQAGYLKI GLVGEETAKA K
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