Gene EcSMS35_3288 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_3288 
Symbol 
ID6146580 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp3364305 
End bp3364799 
Gene Length495 bp 
Protein Length164 aa 
Translation table11 
GC content47% 
IMG OID641618118 
Producthypothetical protein 
Protein accessionYP_001745268 
Protein GI170682896 
COG category[S] Function unknown 
COG ID[COG2862] Predicted membrane protein 
TIGRFAM ID[TIGR00645] conserved hypothetical transmembrane protein 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones54 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACGTT TTCTTGAAAA TGCAATGTAT GCTTCTCGCT GGCTGCTTGC CCCCGTGTAC 
TTTGGCCTTT CGCTGGCGTT AGTTGCCCTG GCGCTGAAGT TCTTCCAGGA GATTATTCAC
GTACTGCCGA ATATCTTCTC GATGGCGGAA TCAGATTTGA TCCTCGTGTT GCTGTCGCTG
GTGGATATGA CGCTGGTTGG CGGTTTGCTG GTGATGGTGA TGTTTTCCGG TTATGAGAAT
TTCGTCTCAC AACTGGATAT CTCCGAGAAC AAAGAGAAGC TGAACTGGCT GGGGAAAATG
GACGCAACGT CGCTGAAAAA CAAAGTAGCA GCGTCGATTG TGGCAATTTC TTCCATTCAC
TTACTGCGCG TCTTTATGGA TGCGAAAAAT GTCCCTGATA ACAAACTGAT GTGGTACGTC
ATTATCCATC TGACGTTTGT GCTCTCTGCA TTTGTGATGG GCTATCTTGA CCGACTGACT
CGTCATAATC ACTGA
 
Protein sequence
MERFLENAMY ASRWLLAPVY FGLSLALVAL ALKFFQEIIH VLPNIFSMAE SDLILVLLSL 
VDMTLVGGLL VMVMFSGYEN FVSQLDISEN KEKLNWLGKM DATSLKNKVA ASIVAISSIH
LLRVFMDAKN VPDNKLMWYV IIHLTFVLSA FVMGYLDRLT RHNH