Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcSMS35_3274 |
Symbol | gsp |
ID | 6146094 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli SMS-3-5 |
Kingdom | Bacteria |
Replicon accession | NC_010498 |
Strand | - |
Start bp | 3352041 |
End bp | 3353900 |
Gene Length | 1860 bp |
Protein Length | 619 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 641618104 |
Product | bifunctional glutathionylspermidine amidase/glutathionylspermidine synthetase |
Protein accession | YP_001745254 |
Protein GI | 170681256 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0754] Glutathionylspermidine synthase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 65 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCAAAG GAACGACCAG CCAGGATGCC CCGTTCGGGA CATTATTGGG CTACGCCCCA GGTGGGGTAG CAATCTACTC TTCAGATTAC AGTTCTCTCG ATCCGCAGGA ATACGAAGAT GACGCCGTAT TCCGTAGCTA TATCGACGAC GAATATATGG GCCACAAATG GCAATGCGTT GAATTTGCTC GCCGTTTTCT CTTTCTGAAT TACGGTGTGG TCTTCACTGA CGTGGGTATG GCGTGGGAGA TTTTCTCGCT GCGCTTCCTG CGTGAAGTGG TTAATGACAA CATCCTGCCA TTGCAGGCAT TTCCTAATGG CTCGCCGCGT GCACCGGTCG CGGGCGCGCT TCTTATCTGG GATAAAGGCG GTGAATTTAA AGACACTGGC CATGTCGCCA TCATTACTCA ATTGCATGGC AACAAAGTCC GTATTGCGGA ACAGAACGTG ATTCATTCCC CGTTGCCGCA AGGGCAACAG TGGACACGCG AGCTGGAGAT GGTGGTCGAA AACGGCTGCT ATACCCTTAA AGACACGTTT GATGACACCA CCATTCTGGG CTGGATGATC CAGACGGAAG ATACCGACTA CAGCTTACCG CAGCCGGAAA TTGCAGGCGA GCTGCTGAAA ATCAGCGGAG CGCGTCTGGA AAACAAAGGT CAGTTTGACG GTAAATGGCT GGATGAAAAA GATCCGCTGC AAAACGCCTA TGTACAGGCC AACGGCCAGG TGATCAATCA GGATCCGTAT CATTACTACA CCATTACCGA GAGTGCCGAG CAGGAGCTGA TTAAAGCCAC CAACGAGCTG CACCTGATGT ATCTTCACGC AACCGACAAG GTGCTAAAAG ATGACAACCT GCTGGCGCTG TTCGACATTC CGAAAATCCT CTGGCCACGT TTGCGTCTCT CCTGGCAGCG TCGCCGTCAC CATATGATCA CCGGTCGTAT GGATTTCTGC ATGGACGAAC GTGGCCTGAA GGTCTACGAA TACAACGCCG ATTCCGCCTC CTGTCATACC GAAGCGGGCT TGATCCTCGA ACGTTGGGCG GAGCAGGGCT ATAAAGGCAA CGGCTTCAAT CCTGCGGAAG GGCTGATTAA CGAACTGGCT GGTGCCTGGA AACACAGTCG TGCACGTCCG TTTGTCCATA TCATGCAGGA CAAAGATATC GAGGAAAACT ATCACGCGCA GTTTATGGAG CAGGCGCTGC ACCAGGCGGG CTTTGAAACG CGTATCTTGC GTGGGTTGGA TGAACTGGGC TGGGATGCTG CCGGGCAACT GATTGATGGG GAAGGGCGAC TGGTTAACTG CGTGTGGAAA ACCTGGGCGT GGGAAACCGC GTTTGATCAG ATTCGTGAAG TCAGCGACCG TGAGTTTGCT GCGGTGCCGA TCCGTACCGG TCATCCGCAA AATGAAGTGC GTCTTATCGA TGTATTGCTG CGCCCGGAAG TGCTGGTCTT TGAACCTCTG TGGACTGTGA TCCCCGGCAA CAAAGCGATT CTGCCGATCC TCTGGTCGCT GTTCCCGCAC CACCGCTATC TGTTGGATAC TGATTTCACC GTTAATGATG AACTGGTGAA AACCGGTTAT GCAGTGAAAC CGATCGCCGG TCGCTGTGGT AGCAATATCG ACCTGGTCAG CCATCATGAA GAGGTGCTGG ACAAAACCAG CGGTAAATTT GCCGAGCAGA AAAACATCTA TCAGCAACTG TGGTGTTTGC CGAAAGTGGA CGGTAAATAC ATTCAGGTAT GTACCTTCAC CGTTGGCGGC AACTACGGTG GGACGTGTTT GCGCGGTGAT GAATCACTGG TCATCAAAAA AGAGAGTGAT ATTGAACCGT TAATTGTGGT GAAAAAGTAA
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Protein sequence | MSKGTTSQDA PFGTLLGYAP GGVAIYSSDY SSLDPQEYED DAVFRSYIDD EYMGHKWQCV EFARRFLFLN YGVVFTDVGM AWEIFSLRFL REVVNDNILP LQAFPNGSPR APVAGALLIW DKGGEFKDTG HVAIITQLHG NKVRIAEQNV IHSPLPQGQQ WTRELEMVVE NGCYTLKDTF DDTTILGWMI QTEDTDYSLP QPEIAGELLK ISGARLENKG QFDGKWLDEK DPLQNAYVQA NGQVINQDPY HYYTITESAE QELIKATNEL HLMYLHATDK VLKDDNLLAL FDIPKILWPR LRLSWQRRRH HMITGRMDFC MDERGLKVYE YNADSASCHT EAGLILERWA EQGYKGNGFN PAEGLINELA GAWKHSRARP FVHIMQDKDI EENYHAQFME QALHQAGFET RILRGLDELG WDAAGQLIDG EGRLVNCVWK TWAWETAFDQ IREVSDREFA AVPIRTGHPQ NEVRLIDVLL RPEVLVFEPL WTVIPGNKAI LPILWSLFPH HRYLLDTDFT VNDELVKTGY AVKPIAGRCG SNIDLVSHHE EVLDKTSGKF AEQKNIYQQL WCLPKVDGKY IQVCTFTVGG NYGGTCLRGD ESLVIKKESD IEPLIVVKK
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