| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_3246 |
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| Symbol | gspE |
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| ID | 6145654 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | - |
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| Start bp | 3316624 |
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| End bp | 3318117 |
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| Gene Length | 1494 bp |
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| Protein Length | 497 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 641618076 |
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| Product | general secretory pathway protein GspE |
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| Protein accession | YP_001745226 |
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| Protein GI | 170683342 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2804] Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB |
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| TIGRFAM ID | [TIGR02533] general secretory pathway protein E |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 47 |
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| Fosmid unclonability p-value | 0.827332 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTGCCTG TAGCACAGGA AACCACCGCT AACACCGTGC GTCTGCCCTA CAGTTTCAGC
CGTCGGTTTA GCCTGGTGGC ATGGTGCGAA GCGTCGCTGG AGATCCTCCA TGTTCATCCG
TTGTCGCTCT CTGTTTTGCA GGAGCTACAA CGGGGGCTGA ACGCGCCCTT TACGCTGCGG
CAAATCGACG AGGCCGAATT TGAACAGCGG CTGAATGCGG TCTGGCAGCG GGACTCTTCC
GAAGCTCGCC AGCTGATGGA AGATCTCGGT TCCGCCGAGG ACTTTTTTAC CCTCGCTGAA
GAACTGCCGG AAACGGAAGA TCTGCTGGAA AGTGACGACG ATGCGCCGAT CATCAAACTG
ATCAACGCCA TGCTGGCAGA GGCAATCAAA GAAGGCGCTT CGGATATCCA CATCGAGACG
TTTGAAAAGA GTCTGGTGAT CCGTTTTCGT GTTGACGGCA CATTACATGA AATGTTGCGC
CCCGGTCGTA AACTGGCCTC GCTGCTGGTC TCGCGTATCA AGGTGATGGC GCGGCTGGAT
ATCGCCGAAA AGCGCGTACC GCAGGATGGC CGTATTGCGC TGCTGCTGGG CGGTCGGGCG
ATTGACGTCC GTGTATCTAC CATGCCTTCC GCCTGGGGGG AACGGGTGGT GCTGCGACTG
CTGGACAAAA ACCAGGCCCG CCTGACGCTG GAGCGTCTGG GGCTTAGCCA GCAACTGACC
GCGCAGTTGC GCCAGCTGTT ACACAAACCG CACGGCATCT TTCTGGTGAC GGGGCCGACG
GGTTCCGGCA AAAGCACCAC GCTGTACGCT GGATTGCAGG AGCTGAACAA CCACTCGCGT
AACATTCTCA CGGTTGAAGA CCCTATCGAA TACATGATTG AAGGGATCGG TCAGACGCAG
GTTAACACCC GCGTCGGCAT GACCTTCGCC CGTGGCCTGC GCGCGATTTT GCGTCAGGAC
CCGGATGTGG TGATGGTCGG TGAAATCCGC GATACCGAAA CCGCAGAAAT CGCTGTTCAG
GCTTCACTGA CCGGACACCT GGTACTTTCC ACCCTGCATA CCAACACAGC GGTGGGGGCG
ATCACGCGTT TGCAGGATAT GGGCGTGGAG CCTTTCCTGC TCTCTTCCAG TTTGACGGGC
GTGATGGCGC AGCGACTGGT TCGCACGCTG TGTCCCGATT GCCGCCAGTC CGCGCCTGCC
ACCAACGAAG AAAAACGCCT GCTGGGGATT ACCGATGCGC ATGCCGTCAC GCTGTACCAT
CCGCAGGGCT GCCCCGCCTG TAATCACAAA GGTTTTCGCG GACGTACTGC CATCCATGAG
CTGATTGTGG TGGACGCCAC ATTGCGTGAT TTGATCCACC GTCAGGCCGG GGAACTGGAG
CTGGAACGTT ATGTCCGGCA ACACTCTGCG GGTATCCGCA GCAACGGCAT TGAGAAAGTG
CTCGCCGGAG AAACCTCTCT CGATGAAGTT CTGCGGGTAA CCATGGAGGC GTAA
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| Protein sequence | MVPVAQETTA NTVRLPYSFS RRFSLVAWCE ASLEILHVHP LSLSVLQELQ RGLNAPFTLR
QIDEAEFEQR LNAVWQRDSS EARQLMEDLG SAEDFFTLAE ELPETEDLLE SDDDAPIIKL
INAMLAEAIK EGASDIHIET FEKSLVIRFR VDGTLHEMLR PGRKLASLLV SRIKVMARLD
IAEKRVPQDG RIALLLGGRA IDVRVSTMPS AWGERVVLRL LDKNQARLTL ERLGLSQQLT
AQLRQLLHKP HGIFLVTGPT GSGKSTTLYA GLQELNNHSR NILTVEDPIE YMIEGIGQTQ
VNTRVGMTFA RGLRAILRQD PDVVMVGEIR DTETAEIAVQ ASLTGHLVLS TLHTNTAVGA
ITRLQDMGVE PFLLSSSLTG VMAQRLVRTL CPDCRQSAPA TNEEKRLLGI TDAHAVTLYH
PQGCPACNHK GFRGRTAIHE LIVVDATLRD LIHRQAGELE LERYVRQHSA GIRSNGIEKV
LAGETSLDEV LRVTMEA
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