| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_3240 |
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| Symbol | gspK |
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| ID | 6142677 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | - |
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| Start bp | 3312415 |
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| End bp | 3313392 |
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| Gene Length | 978 bp |
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| Protein Length | 325 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 641618070 |
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| Product | general secretion pathway protein GspK |
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| Protein accession | YP_001745220 |
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| Protein GI | 170684190 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3156] Type II secretory pathway, component PulK |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.656676 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 46 |
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| Fosmid unclonability p-value | 0.626096 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCACCT TGCCACCAAA ACGCGGAATG GCACTGGTCG TGGTGCTGGT ATTGCTGGCG
GTTATGATGC TGGTGACCAT CACGCTTTCC GGGCGGATGC AGCAACAACT TGGGCGAACG
CGCAGCCAGC AGGAGTACCA GCAGGCGCTG TGGTACAGCG CCAGTGCAGA AAGCCTGGCG
CTGAGCGCGC TCAGTCTGAG CCTGAAAAAT GAAAAGCGTG TGCATCTGGC ACAACCGTGG
GCTTCTGGCC CGCGTTTTTT CCCACTGCCG CAGGGGCAAA TTGCCGTCAC TCTGCGTGAC
GCACAGGCCT GCTTTAACCT GAATGCCCTC GCTCAGCCGA CGACGACGTC GCGTCCGCTC
GCGGTACAAC AACTGATTGC CCTGATCTCG CGCCTCGATG TGCCTGCTTA TCGGGCCGAA
CTGATAGCCG AAAGCCTGTG GGAGTTTATT GACGAAGACC GCAGTGTGCA GACGCGTCTG
GGTCGTGAAG ACAGCGAGTA TCTCGCCCGC TCGGTGCCGT TCTACGCCGC TAATCAACCG
CTGGCTGATA TCAGCGAGAT GCGCGTGGTG CAGGGAATGG ACGCTGGGCT TTATCAAAAA
CTGAAACCGC TGGTCTGTGC GCTGCCGATG GCCCGCCAGC AAATCAACAT CAATACATTA
GATGTCACGC AAAGTGTGAT TCTTGAGGCG CTGTTTGACC CGTGGTTAAG CCCTGTTCAG
GCGCGGGCGT TATTACAACA ACGTCCGGCG AAGGGCTGGG AAGATGTCGA TCAGTTTCTT
GCTCAGCCGC TACTTGCAGA CGTCGATGAG CGTACTAAAA AACAGCTAAA AACCATCCTG
AGCGTGGACA GCAATTACTT CTGGCTGCGT TCAGATATCA CCGTGAATGA GATTGAACTG
ACGATGAATT CGTTAATTGT CCGCATGGGC CCACAACACT TTTCTGTTCT CTGGCATCAG
ACAGGAGAAA GTGAGTGA
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| Protein sequence | MITLPPKRGM ALVVVLVLLA VMMLVTITLS GRMQQQLGRT RSQQEYQQAL WYSASAESLA
LSALSLSLKN EKRVHLAQPW ASGPRFFPLP QGQIAVTLRD AQACFNLNAL AQPTTTSRPL
AVQQLIALIS RLDVPAYRAE LIAESLWEFI DEDRSVQTRL GREDSEYLAR SVPFYAANQP
LADISEMRVV QGMDAGLYQK LKPLVCALPM ARQQININTL DVTQSVILEA LFDPWLSPVQ
ARALLQQRPA KGWEDVDQFL AQPLLADVDE RTKKQLKTIL SVDSNYFWLR SDITVNEIEL
TMNSLIVRMG PQHFSVLWHQ TGESE
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